microbe.net

homemicrobiome.com

About « Home Microbiome Study

http://homemicrobiome.com/about

The Home Microbiome Study is lead by PI Jack Gilbert, postdoc Daniel Smith, and technician Jarrad Hampton-Marcell at Argonne National Laboratories. And funded by the Alfred P. Sloan Foundation. This study is working in collaboration with MicroBE.net. And the Earth Microbiome Project. To bring together microbial samples from as many environments as possible in order to understand how microbial community structure is shaped by environmental factors. Studying the microbes in our homes.

weallseqtoseq.blogspot.com

USeq, MiSeq, WeAllSeq...to Seq: January 2013

http://weallseqtoseq.blogspot.com/2013_01_01_archive.html

USeq, MiSeq, WeAllSeq.to Seq. Attempts to keep up with scientific sprinters.while in flip flops. Sunday, January 20, 2013. Blogs I follow, for those who are now addicted to Science-y blogs. So it was requested of me to post what blogs I personally follow so I will list them below. Normally I subscribe via RSS/Google reader. If you have google reader and there isn't an RSS subscribe button on the blog simply copy/paste the URL into google reader and it'll subscribe to what's posted at the URL. Evolutionar...

phylogenomics.blogspot.com

The Tree of Life: #badomics words

https://phylogenomics.blogspot.com/p/my-writings-on-badomics-words.html

The Tree of Life. Blog of Jonathan A. Eisen. Professor at U.C. Davis. I am a bit obsessed with the use of "omics" in science and in particular the adding of this suffix onto everything and anything. Here are some writings / stories on the topic. Worst New Omics Word Award. Badomics words and the power and peril of the ome-meme. Richard Grant in the Guardian: Say "Ome": scientists get silly The proliferation of various "–omes" betrays a deep-seated love of the irreverent. Badomics word of the year already?

maojf.blogspot.com

evolving all we are: SysCall - Distinguishing heterozygous sites from systematic errors

http://maojf.blogspot.com/2013/11/syscall-distinguishing-heterozygous.html

Evolving all we are. SysCall - Distinguishing heterozygous sites from systematic errors. Http:/ bio.math.berkeley.edu/SysCall/. SysCall is a logistic regression based classifier. Given a list of candidate heterozygous genomic locations and a sam file of sequenced reads SysCall classifies each genomic location as either a heterozygous site or a systematic error and outputs according lists, along with the assigned posterior probabilities. The submitted manuscript describing SysCall can be found here. On th...

contagions.wordpress.com

November | 2011 | Contagions

https://contagions.wordpress.com/2011/11

Monthly Archives: November 2011. Mapping Smallpox, Malaria, and Leprosy. November 29, 2011. Contagion by Haisam Hussein of Lapham's Quarterly (Click the map to enlarge). I love looking at infection maps. Hat-tip to Michael Walsh at Germscape. For finding this map. There is a lot of information on this map and unfortunately any text that might have come with it at. Malaria deaths in the United States, 1870 census. Over two centuries ago. Did India and China Escape the Black Death? November 26, 2011. The B...

maojf.blogspot.com

evolving all we are: De Novo Transcriptome Assembly with Trinity: Protocol and Videos

http://maojf.blogspot.com/2013/11/de-novo-transcriptome-assembly-with.html

Evolving all we are. De Novo Transcriptome Assembly with Trinity: Protocol and Videos. Http:/ gettinggeneticsdone.blogspot.com/2013/10/de-novo-transcriptome-assembly-trinity.html. 订阅： 帖子评论 (Atom). List of Bioinformatics Workshops and Training Reso. A Mitochondrial Manhattan Plot. SysCall - Distinguishing heterozygous sites from s. PubMed Commons: One post-publication peer review f. Useful Unix/Linux One-Liners for Bioinformatics. De Novo Transcriptome Assembly with Trinity: Proto. Beware of the snail.

babeproject.org

The Baby Associated Built Environment Microbiome Project - Baby Associated Built Environment Microbiome Project

http://www.babeproject.org/index.html

The BA.B.E Project. Baby Associated Built Environment Microbiome Project. January 13, 2017. Thanks for having our bac, Zac! October 30, 2015. BABE Microbiome Project featured on microbe.net. An overview of the project was recently posted on the microbiology news site microbe.net. You can view the full article here. July 08, 2015. Mother's Littlest Helpers: New perspective piece by Zac Lewis and Katie Hinde in Science. View the full article here. April 10, 2015. Lewis et al. paper profiled by NPR. Zachery...

babeproject.org

The Baby Associated Built Environment Microbiome Project

http://www.babeproject.org/2015/10/30/BABE-Microbiome-Project-featured-on-microbe-net.html

The BA.B.E Project. The Baby Associated Built Environment Microbiome Project. October 30, 2015. BABE Microbiome Project featured on microbe.net. An overview of the project was recently posted on the microbiology news site microbe.net. You can view the full article here. This research is supported by an Alfred P. Sloan Foundation Microbiology of the Built Environment program postdoctoral fellowship to Dr. Zachery Lewis. Site Designed by Samir Akre.

phylogenomics.me

Questions for Jonathan Eisen (Advice, Background, Projects, etc) | Jonathan Eisen's Lab

https://phylogenomics.me/questions-for-jonathan-eisen-advice-background-projects-etc

Jonathan Eisen's Lab. All microbes, all the time. May the microbes be ever in your favor. UC Davis Genome Center. UC Davis Dept. of Evolution and Ecology. UC Davis Center for Population Biology. UC Davis Dept. of Medical Microbiology and Immunology. DOE Joint Genome Institute. UC Davis Population Biology Graduate Group. UC Davis Microbiology Graduate Group. UC Davis Computer Science Graduate Group. UC Davis Ecology Graduate Group. UC Davis Integrated Genetics and Genomics Graduate Group. Eisen’s Tr...