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Join Us

http://www.computationalbioenergy.org/joinus.html

Administration of our local installation of databases and bioinformatics/data analysis software tools;. Identify and develop software tools for efficient integrating and mining diverse types of biological data;. Enhancing existing and rapid developing new software tools for querying, reporting, and visualizing large amounts of data;. Development and implementation of relational database schemes;. Any other job/work assigned. Applicants please send resume to suxq@qibebt.ac.cn. CAS-QIBEBT provides an ousta...

2

Bioinformatics Group

http://www.computationalbioenergy.org/index.html

The Bioinformatics Group develops novel computatonal solutions to enable large-scale analysis of biological data. It is in Single-cell Reseearch Center. Of Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences (QIBEBT-CAS, 中国科学院青岛生物能源与过程研究所). Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences.

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Publications

http://www.computationalbioenergy.org/publications.html

科学通报, 2015, 60: 1 13. 2 Dong-Dong Meng, Yu Ying, Xiao-Hua Chen, Ming Lu, Kang Ning, Lu-Shan Wang, Fu-Li Li*. Distinct Roles for Carbohydrate-Binding Modules of Glycoside Hydrolase 10 (GH10) and GH11 Xylanases from Caldicellulosiruptor sp. Strain F32 in Thermostability and Catalytic Efficiency. Applied and Environmental Microbiology 2015. 3 Lihui Ren, Xiaoquan Su, Yun Wang, Jian Xu and Kang Ning*. QSpec: online control and data analysis system for single-cell Raman spectroscopy. IEEE ISB, 2014. Microbial ...

4

Software

http://www.computationalbioenergy.org/software.html

A Parallel Metagenomic Analysis Pipeline. Version 3.3.1. A Parallel Quality Control computational engine for NGS data. A Metagenomic Database system toolkit. An Metagenomic Database and Analysis system. A Raman Spectrum Acquisition and Analysis System for Single-Cell Research. A Multiple Phenotypes Simulation System for Single-Cell Research. A Raman Spectra Database for Single-Cell Research from RACS system. A package of scripts for QIBEBT's Next Generation Sequencing projects.

5

QC-Chain

http://www.computationalbioenergy.org/qc-chain.html

QC-Chain is a package of quality control tools for next generation sequencing (NGS) data, consisting of both raw reads quality evaluation and. Contamination screening, which could identify all possible contamination sequences. This QC pipeline supplies a fast, easy-to-use, and parallel processing approach to accomplish the comprehensive QC steps, which could be applied widely to almost all kinds of NGS reads, including genomic, transcriptomic and metagenomic data. Meta-QC-Chain Version 1.0.

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Functional Genomics

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As one of the six research groups in BioEnergy Genome Center. The Functional Genomics Group has been discovering, characterizing and genetically manipulating single-cell microalgae, Gram-positive thermophilic bacteria. To achieve these goals, the group applies both experimental and computational genomics approaches. Particular emphasis on the development of novel tools for sequencing, analysis and engineering of genomes, transcriptomes and regulomes. 此页面上的内容需要较新版本的 Adobe Flash Player。

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