plexdb.org
PLEXdb Tools
http://www.plexdb.org/modules/PD_general/tools.php
Middot; Gene List Suite. Middot; Expression Atlases. Middot; About PLEXdb. PLEXdb is committed to making expression data publicly available to researchers world-wide. Create, analyze and annotate gene lists. Search for experiments where the expressions of queried genes fluctuate (oscillate) the most. Data mining via fluctuation in expression: Get the probe sets /genes whose fluctuation in expression (Coeff. of Variation or CV) matches your specifications. Get consensus sequence for probesets. Bioconducto...
wernerlab.org
Software Resources - Werner Lab
http://www.wernerlab.org/software
Check out the MacQIIME page. For more information on an easy way to install and use QIIME on your Mac OS X computer. QIIME is a python-based software pipeline for analyzing high-throughput sequencing data (It goes all the way from raw SFF files to final figures! It can be difficult to install, unless you are very familiar with Unix and compiling code. To make things simpler for myself and collaborators, I put together this pre-compiled package. Some great open software that students should try out. Recom...
exon.niaid.nih.gov
https://exon.niaid.nih.gov/links.html
National Institute of Allergy and Infectious Diseases. A service of the Bioinformatics and Computational Biosciences Branch. At the Office of Cyber Infrastructure and Computational Biology. General Bioinformatics Links and Resources. A searchable directory of links maintained by the Bioinformatics Graduate Program at the University of British Columbia. The Database for Annotation, Visualization and Integrated Discovery (DAVID). European Bioinformatics Institute (EBI) Toolbox. A collection of open-source ...
math-stat.net
Statistical Software YAKUP ARI
http://www.math-stat.net/statsoftwares.htm
ASA Section on Statistical Computing. General Purpose Statistics Packages. Design of Experiments Software. Time Series and Econometric Software. Other Specialized Statistics Packages. Fortran/C/C Libraries for Statistical Analysis. Help with Statistics Software. Most of these are open-source software projects. GGobi Data Visualization System. The Omega Project for Statistical Computing. The R Project for Statistical Computing. An object-oriented data analysis framework. The Visual Statistics System.
xposre.nl
FAQ | Xpos're
https://www.xposre.nl/resources/res_faq.html
Last updated: October 17, 2013. This list will help you to find tools together with readings about how to use them. It is an easy way to go through all the information on this website. To let this page work properly, allow blocked content in Internet Explorer. Click on one of the categories below:. How can I add sound to a PowerPoint publication? PowerPoint has the option to insert audio into a slide (see Insert ribbon). Is it possible to embed an interactive / animated map into a PowerPoint slide? And f...
cran.r-project.org
An Introduction to R
https://cran.r-project.org/doc/manuals/R-intro.html
An Introduction to R. 1 Introduction and preliminaries. 11 The R environment. 12 Related software and documentation. 13 R and statistics. 14 R and the window system. 15 Using R interactively. 16 An introductory session. 17 Getting help with functions and features. 18 R commands, case sensitivity, etc. 19 Recall and correction of previous commands. 110 Executing commands from or diverting output to a file. 111 Data permanency and removing objects. 2 Simple manipulations; numbers and vectors. 634 Attaching...
ggobi.blogspot.com
GGobi: 2009 Chambers award winner announced
http://ggobi.blogspot.com/2009/04/2009-chambers-award-winner-announced.html
News GGobi data visualization system. Interactive and dynamic graphics. Tuesday, April 28, 2009. 2009 Chambers award winner announced. We are pleased to announce that the judges of the Chambers Award have selected the winner of the 2009 competition: Yihui Xie, from the Renmin University of China. Yihui received this year's award for his submission "animation," an R package for using graphical and other animations to communicate the results of statistical simulations. April 29, 2009. And the demo movies.
ggobi.blogspot.com
GGobi: February 2006
http://ggobi.blogspot.com/2006_02_01_archive.html
News GGobi data visualization system. Interactive and dynamic graphics. Thursday, February 23, 2006. You've probably noticed the new design of the GGobi's website. We hope you like it! Be sure to check out how GGobi got its name. And the new demo of the parallel coordinates. We know that a lot of people have been having problems viewing the movies, and we are working on a solution. Stay tuned! Wednesday, February 15, 2006. GGobi2 beta for Windows! Much much more stable (thanks to Michael's hard work).
adrian.waddell.ch
R Introduction for Economics Students, 2012
http://adrian.waddell.ch/RforEcon
R introduction for Economics Students. Adrian Waddell, University of Waterloo, 2012. This is the course webpage for a course called "R, LaTeX, Sweave and R packages" that I taught to students from the department of economics at the University of Waterloo. All my slides are uploaded as a movie in the Quicktime. This web page is work in progress. I will be updating the content here frequently. So keep coming back. Lecture 1: Introduction to R. An Introduction to R. Applied Econometrics with R. Lattice, Mul...
