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e-biogrid.com

e-BioGrid: MassSpectrometry

http://www.e-biogrid.com/masspec.html

Mass spectrometry in life sciences involves quantative and qualitative protein and metabolite analyses in biological samples. It produces large amounts of data that requires storage, and computational intensive analysis for the identification of biological identities in the peak patterns. Liquid chromatography - mass spectrometry (LC-MS) is a commonly used and rapidly evolving technology in many fields of biomolecular analysis, for instance in proteomics and metabolomics. Projects in this technology area.

e-biogrid.nl

e-BioGrid: Nanoscopy

http://www.e-biogrid.nl/nanoscopy.html

Research in nanoscopy (e.g. electron microscopy) and imaging involves large datasets of images. Not only is there a data storage challenge, data management and processing requires high performance computing facilities and connectivity for access to data. The main projects involves building a pipeline to construct 3D electron microscopy images in collaboaration with NECEN. The e-BioGrid team is open to take dedicated Nanoscopy and imaging projects on board. Contact us. Projects in this technology area.

e-biogrid.com

e-BioGrid: Get involved

http://www.e-biogrid.com/get-involved.html

We offer support to both bioinformaticians and biologists in the life-science research community. We therefore invite researchers to share difficulties, obstacles and problems they encounter in life-science research projects. Proposals for a new project can be submitted when the e-BioGrid project conditions. Are met. Please submit your request by using this support application form. 2013-07-30 - Mass spectrometry. 2013-07-30 - Generic infrastructure. 2013-07-30 - Next-generation sequencing.

e-biogrid.com

e-BioGrid: NextGenerationSequencing

http://www.e-biogrid.com/next-generation-sequencing.html

E-BioGrid is open to take more Next-Generation Sequencing support projects on board. Contact us. If you are involved in NGS and you need support in software or hardware infrastructure. Projects in this technology area. Grid- and cloud computing for high-throughput assembly and annotation of (meta)genome sequences *. Sacha van Hijum, Center for Molecular and Biomolecular Informatics. A grid-enabled protein function annotation pipeline using InterProScan is in development and almost finished. Sacha van Hij...

e-biogrid.nl

e-BioGrid: Projects

http://www.e-biogrid.nl/projects.html

E-BioGrid projects (2010-2012) were selected and categorized according to their technology area ( next-generation sequencing. Structure determination and prediction. Projects that are applicable to any of the technology areas and focus on the infrastructure technology, are listed under generic infrastructure. For a complete list of projects, see below. We distinguish between 'main' development projects, and 'dedicated' on demand support projects. Read more here. All projects are listed below. A EU funded...

e-biogrid.com

e-BioGrid: Results

http://www.e-biogrid.com/results.html

With the proven success of the e-BioGrid project, life science e-infrastructure support and development is continued within SURFsara. With a coordinating team and life science specific support. The results of each of the main e-BioGrid projects can be found at the technology area project pages: biobanking. Next generation sequencing (WUR). Next generation sequencing (VLPB). Results of other ad-hoc support projects are found at the project pages. A tool to design tiled multistrain micro-array probes.

e-biogrid.nl

e-BioGrid: colophon

http://www.e-biogrid.nl/44.html

This website is developed for the e-BioGrid project by the e-BioGrid e-core team and our webmasters. For more information or suggestions on updates of the content of the website you can contact us at by email. The project "Using large scale computing facilities for Biobanks, knowledge discovery across biobanks and Enrichment of Biobanks with whole genome information." has been added/updated. read more. 2013-07-30 - Mass spectrometry. 2013-07-30 - Generic infrastructure. Subscribe to our newsletter here.

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e-BioGrid: NMR Spectroscopy

http://www.e-biogrid.nl/nmr-spectroscopy-and-modelling.html

NMR and SAXS Spectroscopy and molecular modeling. Structural biology research demands high performance computing facilities for the analysis of spectra and especially for the molecular modelling of protein structures. The main project involves the development of an e-infrastructure for the NMR and SAXS spectroscopy community in collaboration with the e-NMR community. Access to the infrastructure is provided through a portal integrating commonly used software and GRID technology. The objective of WeNMR.

e-biogrid.com

e-BioGrid: News & events

http://www.e-biogrid.com/news-and-events.html

The e-BioGrid project ended december 2012. With the proven succes of e-BioGrid, life science e-infrastructure support and development will be continued within SURFsara. As from January 2013, applications for support and access to the national e-infrastructure should be submitted to SURFsara instead of BiG Grid. Read more here. In collaboration with NBIC. The e-BioGrid team developed NBIC Galaxy on Cloud. Scheikundestudenten van de Universiteit Utrecht gebruiken de HPC Cloud-infrastructuur van SARA en BiG...

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e-BioGrid: Home

http://www.e-biogrid.com/home.html

E-BioGrid: enabling Life Science Research and Technology. Examples include the availibility of grid computing for computational intensive DNA sequence alignments, and building a pipeline for metagenomics analyses. Review the projects pages. To find out what e-BioGrid is working on or what has been developed. Subscribe to our newsletter here. Follow our RSS news feed!