derekweitzel.blogspot.com

Derek Weitzel

Solutions to computer problems. Friday, August 7, 2015. GPUs and adding new resources types to the HTCondor-CE. In the past, it has been difficult to add new resource types to the OSG CE, whether it was a Globus GRAM CE or a HTCondor-CE. But, it has just gotten a little bit easier. Today I added HCC's GPU resources to the OSG with this new method. With a (yet unapproved) pull request. Default remote cerequirements = "RequestGpus = 1". Local Submit Attributes Script. The local submit attributes script tra...

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Solutions to computer problems. Friday, August 7, 2015. GPUs and adding new resources types to the HTCondor-CE. In the past, it has been difficult to add new resource types to the OSG CE, whether it was a Globus GRAM CE or a HTCondor-CE. But, it has just gotten a little bit easier. Today I added HCC's GPU resources to the OSG with this new method. With a (yet unapproved) pull request. Default remote cerequirements = RequestGpus = 1. Local Submit Attributes Script. The local submit attributes script tra...

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Derek Weitzel | derekweitzel.blogspot.com Reviews

https://derekweitzel.blogspot.com

Solutions to computer problems. Friday, August 7, 2015. GPUs and adding new resources types to the HTCondor-CE. In the past, it has been difficult to add new resource types to the OSG CE, whether it was a Globus GRAM CE or a HTCondor-CE. But, it has just gotten a little bit easier. Today I added HCC's GPU resources to the OSG with this new method. With a (yet unapproved) pull request. Default remote cerequirements = "RequestGpus = 1". Local Submit Attributes Script. The local submit attributes script tra...

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derekweitzel.blogspot.com

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Derek Weitzel: March 2014

http://derekweitzel.blogspot.com/2014_03_01_archive.html

Solutions to computer problems. Wednesday, March 12, 2014. A HCC Dashboard with OSG Accounting. After the 2013 SuperComputing Conference. We found ourselves with a extra monitor at HCC. Therefore, I set about creating a dashboard which can show the current status of HCC. I have an interest in data visualization, and follow many blogs that show off new methods. On one occasion, I saw Dashing. Dashing is a dashboard framework made by Shopify. And plain old HTML. I wrote several jobs. A widget is a combinat...

2

Derek Weitzel: Building an OSG-Client LiveUSB

http://derekweitzel.blogspot.com/2012/02/building-osg-client-liveusb.html

Solutions to computer problems. Friday, February 24, 2012. Building an OSG-Client LiveUSB. Nebraska/OSG USB keys to be distributed at OSG-AHM 2012. Since we have started using RPM's for osg software, I've been interested if it where possible to make a LiveUSB of the client. Due to the great documentation provided on the Scientific Linux LiveCD. Page, along with the CentOS LiveCD. Page, I've created a OSG Client LiveUSB that will be put on the keys. Desktop of OSG Client Live CD. I am open for suggestions...

3

Derek Weitzel: Hadoop Viz

http://derekweitzel.blogspot.com/2009/12/hadoop-viz.html

Solutions to computer problems. Wednesday, December 23, 2009. Something I've been working on. Subscribe to: Post Comments (Atom). I am a computer science researcher at the University of Nebraska - Lincoln specializing in distributed systems conducting research for the Open Science Grid. View my complete profile. Awesome Inc. template. Powered by Blogger.

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Derek Weitzel: OSG... There's an app for that

http://derekweitzel.blogspot.com/2011/09/osg-theres-app-for-that.html

Solutions to computer problems. Tuesday, September 13, 2011. OSG There's an app for that. So I thought this weekend would be a good time to learn something new. I put together an OSG Android App. Not all the features are working yet, but I tend to release early and often on all my projects. I was motivated by SuperComputing '11 coming up. My other visualization. So far, the working features are:. Automatically updated global usage data on the home screen. Usage queried from gratia for every site and VO.

5

Derek Weitzel: January 2015

http://derekweitzel.blogspot.com/2015_01_01_archive.html

Solutions to computer problems. Sunday, January 25, 2015. HTCondor CacheD: Caching for HTC - Part 2. In the previous post. I discussed why we decided to make the HTCondor CacheD. This time, we will discuss the operation and design of the CacheD, as well as show an example utilizing a BLAST database. It is important to note that the CacheD is still very much "dissertation-ware." It functions enough to demonstrate the improvements, but not enough to be put into production. The CacheD is the daemon that man...

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stevencox | An Open Science Grid Work Log

https://osglog.wordpress.com/author/stevencox

An Open Science Grid Work Log. Things seen on the OSG trail. Duke Physics MPI at RENCI Blueridge with Grayson and Pegasus 4.0. June 6, 2012. Overivew Duke Physics will be running MPI jobs on RENCI Blueridge. The model is new and expected to grow. It’s been built with cluster specific libraries so it’ll be executed at Blueridge for the foreseeable future. At the same time, … Continue reading →. February 17, 2012. High Throughput Computing (HTC). High Throughput Parallel Computing (HTPC). February 13, 2012.

osglog.wordpress.com

A Tier-3 Open Science Grid Compute Element | An Open Science Grid Work Log

https://osglog.wordpress.com/2010/08/16/planning-an-open-science-grid-osg-compute-element-ce

An Open Science Grid Work Log. Things seen on the OSG trail. Grid Authorization with MyProxy. Parallel Amber9 →. A Tier-3 Open Science Grid Compute Element. August 16, 2010. I RENCI Blueridge as Compute Element. RENCI’s new Open Science Grid (OSG) Compute Element (CE). Will accept job submissions to be executed on the Blueridge cluster. A CE presents a uniform interface other OSG sites can use to submit jobs. Major functional components of a CE include:. Compute elements must make provision for storage o...

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An OSG Map | An Open Science Grid Work Log

https://osglog.wordpress.com/2010/09/28/an-osg-map

An Open Science Grid Work Log. Things seen on the OSG trail. IRODS in the Duke, NERSC, RENCI Collaboration. PMEMD on Blueridge →. September 28, 2010. The Open Science Grid is a large global collaboration. Thousands of computing resources are shared through its protocols and conventions. While this is good news, it’s not always a simple matter to understand how the resources are connected and what’s available. These and other needs suggested it would be useful to have a visual map of the OSG. Which seek t...

osglog.wordpress.com

SAGA Hadoop | An Open Science Grid Work Log

https://osglog.wordpress.com/2012/02/17/saga-hadoop

An Open Science Grid Work Log. Things seen on the OSG trail. NAMD with PBS and Infiniband on NERSC Dirac. Duke Physics MPI at RENCI Blueridge with Grayson and Pegasus 4.0 →. February 17, 2012. Has become a fixture where big data is concerned but it has been difficult to use in HPC and HTC cluster environments. This is becoming unfortunate as an increasing number of new algorithms assume Hadoop’s an option. I tried SAGA-Hadoop first but it should be noted that, myHadoop. To make this plausible for the OSG:.

osglog.wordpress.com

Grid Jobs with OSG Matchmaker | An Open Science Grid Work Log

https://osglog.wordpress.com/2010/09/07/grid-jobs-with-osg-matchmaker

An Open Science Grid Work Log. Things seen on the OSG trail. IRODS in the Duke, NERSC, RENCI Collaboration →. Grid Jobs with OSG Matchmaker. September 7, 2010. Thanks to Mats for the very helpful advanced grid job example. Provided in the OSG Matchmaker. It Isn’t Easy Being a Grid Job. A central challenge of running complex grid applications is managing the schedule, failures and diverse outcomes affecting individual compute jobs. Specify the order of execution of parts of the job. Define policies for co...

osglog.wordpress.com

High Throughput Parallel Molecular Dynamics on OSG | An Open Science Grid Work Log

https://osglog.wordpress.com/2010/11/04/high-throughput-parallel-molecular-dynamics

An Open Science Grid Work Log. Things seen on the OSG trail. Engage Submit Host Architecture →. High Throughput Parallel Molecular Dynamics on OSG. November 4, 2010. RENCI’s working with researchers interested in running high throughput parallel molecular dynamics simulations on OSG. The program we’d like to execute is called PMEMD (Particle Mesh Ewald Molecular Dynamics). PMEMD is a high-performance, parallel component of the larger Amber9. Launch an MPI job using. The use of the RENCI CyberInfrastructu...

osglog.wordpress.com

An Open Science Grid Work Log | Things seen on the OSG trail. | Page 2

https://osglog.wordpress.com/page/2

An Open Science Grid Work Log. Things seen on the OSG trail. Newer posts →. Protected: Grayson – Science Workflow on the Hybrid Grid. August 10, 2011. This content is password protected. To view it please enter your password below:. High Throughput Computing (HTC). High Throughput Parallel Computing (HTPC). Whole Genome Sequencing and Pegasus. June 7, 2011. As a first step, they joined the OSG Engage. VO This provides them access to the new Engage Submit node. Getting used to searching the Pegasus logs f...

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PMEMD on Blueridge | An Open Science Grid Work Log

https://osglog.wordpress.com/2010/10/06/pmemd-on-blueridge

An Open Science Grid Work Log. Things seen on the OSG trail. The OSG Compute Element A Trip Report →. October 6, 2010. This is pmemd compiled against native MPI libraries executing on the RENCI Blueridge cluster. The job submission workflow uses the RENCI-CI script library. The job run script uses Globus tools to transfer the pmemd application and input files to Blueridge. There, it uses PBS tools directly to submit the job. Job submission is done directly to the new Blueridge CE. Enter your comment here.

osglog.wordpress.com

Virtualizing Engage Central | An Open Science Grid Work Log

https://osglog.wordpress.com/2010/10/25/osg-cyberinfrastructure-vm-migration

An Open Science Grid Work Log. Things seen on the OSG trail. High Throughput Parallel Molecular Dynamics on OSG →. October 25, 2010. Well, this is just not going to be an interesting post to most of you. That’s just the way it is sometimes. We need to move engage-central off of the old physical hardware it’s on to a new virtual machine. The old machine will remain online until we’re comfortable everything on the new one is working properly. Create the virtual machine. Operating System: CentOS 5.5. Chown ...

osglog.wordpress.com

iRODS in the Duke, NERSC, RENCI Collaboration | An Open Science Grid Work Log

https://osglog.wordpress.com/2010/09/08/gsi-authentication-in-irods

An Open Science Grid Work Log. Things seen on the OSG trail. Grid Jobs with OSG Matchmaker. An OSG Map →. IRODS in the Duke, NERSC, RENCI Collaboration. September 8, 2010. Research Data and Computation Scenario. Here are some basic characteristics of the problem space we’re addressing in our collaboration with Duke Physics and NERSC:. The Duke research team will run OSG grid jobs manipulating terabytes of data. The team will use iRODS as the logical data grid infrastructure. There are several available c...

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Derek W's Blog | Writing by Derek W

Derek W's Blog. Writing by Derek W. November 21, 2013. I set out on my Bangkok evening walk. It is 6:55pm. The sun is thoroughly down, the street vendors are in full swing, the plastic tables and chairs on the sidewalks are packed with Thais eating meals made by old women with portable carts. I don’t get too many looks as I walk about. What is there to stare at? July 30, 2013. 8230;then another drive, and we arrived at a hotel we set up until I could find suitable long-term accommodation. The weather has...

derekweitzel.blogspot.com

Derek Weitzel

Solutions to computer problems. Friday, August 7, 2015. GPUs and adding new resources types to the HTCondor-CE. In the past, it has been difficult to add new resource types to the OSG CE, whether it was a Globus GRAM CE or a HTCondor-CE. But, it has just gotten a little bit easier. Today I added HCC's GPU resources to the OSG with this new method. With a (yet unapproved) pull request. Default remote cerequirements = "RequestGpus = 1". Local Submit Attributes Script. The local submit attributes script tra...

derekweitzel.com

Derek Weitzel

Welcome to Derek’s website. Weitzel, D., Frey, J., Mambelli, M., Fraser, D., Ahronovitz, M., and Swanson, D. BoscoR: Extending R from the desktop to the Grid. MTAGS’ 14. Weitzel, D., Sfiligoi, I., Bockelman, B., Frey, J., Wuerthwein, F., Fraser, D., and Swanson, D. (2014, June). Accessing opportunistic resources with Bosco. In Journal of Physics: Conference Series (Vol. 513, No. 3, p. 032105). IOP Publishing. Online. Weitzel, D., Bockelman, B., Fraser, D., Pordes, R., and Swanson, D. ...Andrews, W., ...

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DEREK A. WELLER

DEREK A. WELLER. 100 Drake's Landing Road, Suite 260. Greenbrae, California 94904. Land Use and Development. California Real Estate, Land Use and Development, and Business Attorney. Purchase and Sale Transactions. Purchase and Sale Transactions. TIC and Co-Ownership Agreements. General Real Property Matters. Title Review and Insurance. Due Diligence and Disclosures. Property Tax and Reassessments. Land Use and Development. Entitlements, Approvals and Permits. Subdivisions and Land Development.

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Derek's Blog | The business of fitness

The business of fitness. It seems we can’t find what you’re looking for. Perhaps searching can help. Blog at WordPress.com. Follow “Derek's Blog”. Get every new post delivered to your Inbox. Join 569 other followers. Build a website with WordPress.com.

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Derek Wells

Independent IT Management Consultant. A highly experienced senior Programme and Project Management professional whose ability to resolve critical dysfunctional situations in a variety of sectors has led to successful consultancy assignments for renowned international organisations such as Centrica, Legal and General, BT, ABN Amro, General Dynamics, Barclays, Anglian Water and NATO. Delivers step-change improvements plus ‘value for money’ outcomes. Unfazed by scale or complexity:. Posted by Derek Wells.

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Derek Wells

Independent IT Management Consultant. A highly experienced senior Programme and Project Management professional whose ability to resolve critical dysfunctional situations in a variety of sectors has led to successful consultancy assignments for renowned international organisations such as Centrica, Legal and General, BT, ABN Amro, General Dynamics, Barclays, Anglian Water and NATO. Delivers step-change improvements plus ‘value for money’ outcomes. Unfazed by scale or complexity:. Posted by Derek Wells.