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ANnOTATE

FISH-it presents a searchable teleost database for more than 20 fish transcriptomes. It aims to collect assembled data from fish species which are published in public repositories of mRNA, collections of expressed sequence tags, species specific transcriptome databases, as well as data retrieved from in-house sequences projects. Sequences can be searched via the site's Blast search which is being updated regularly. Search by Gene Name:. Search by Gene Accession No.:. For any questions or comments.

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Elena Sarropoulou

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Elena Sarropoulou

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FISH-it presents a searchable teleost database for more than 20 fish transcriptomes. It aims to collect assembled data from fish species which are published in public repositories of mRNA, collections of expressed sequence tags, species specific transcriptome databases, as well as data retrieved from in-house sequences projects. Sequences can be searched via the site's Blast search which is being updated regularly. Search by Gene Name:. Search by Gene Accession No.:. For any questions or comments.
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1 browse
2 fish
3 genes
4 blast
5 search by organism
6 acanthopagrus schlegelii
7 acipenser naccarii
8 acipenser oxyrinchus
9 acipenser schrenckii
10 anoplopoma fimbria
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browse,fish,genes,blast,search by organism,acanthopagrus schlegelii,acipenser naccarii,acipenser oxyrinchus,acipenser schrenckii,anoplopoma fimbria,astatotilapia burtoni,astyanax mexicanus,carassius auratus,ctenopharyngodon idella,cynoglossus semilaevis
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ANnOTATE | fish-it.org Reviews

https://fish-it.org

FISH-it presents a searchable teleost database for more than 20 fish transcriptomes. It aims to collect assembled data from fish species which are published in public repositories of mRNA, collections of expressed sequence tags, species specific transcriptome databases, as well as data retrieved from in-house sequences projects. Sequences can be searched via the site's Blast search which is being updated regularly. Search by Gene Name:. Search by Gene Accession No.:. For any questions or comments.

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fish-it.org fish-it.org
1

ANnOTATE

http://www.fish-it.org/hcmr/index.php

FISH-it presents a searchable teleost database for more than 20 fish transcriptomes. It aims to collect assembled data from fish species which are published in public repositories of mRNA, collections of expressed sequence tags, species specific transcriptome databases, as well as data retrieved from in-house sequences projects. Sequences can be searched via the site's Blast search which is being updated regularly. Search by Gene Name:. Search by Gene Accession No.:. For any questions or comments.

2

ANnOTATE

http://www.fish-it.org/hcmr/browse_fish.php

No of annotated genes in ANnOTATE DB.

3

ANnOTATE

http://www.fish-it.org/hcmr/about.php

About the project and us. The fast progress in sequencing technology, namely the next-generation sequencing technologies has resulted in the accumulation of genome as well as of transcriptome sequences. Data is stored in database like the SRA database of NCBI but also in databases from national and international projects. The disperse manner of searchable databases makes it difficult for researcher to retrieve quickly information for specific genes and organisms.

4

ANnOTATE

http://www.fish-it.org/hcmr/help.php

FISH-it presents a searchable database for more than 20 fish transcriptomes. The present database collects assembled data from divers fish species from public repositories of mRNA, collections of expressed sequence tags, divers species specific transcriptome databases as well as data retrieved from in-house sequences projects. Page the user may search for a transcript by an accession number or a sequence name or by the common or latin name of an organism. The user may browse. For any questions or comments.

5

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http://www.fish-it.org/hcmr/loadblast.php

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News - ;

http://annotate.weebly.com/news.html

NEW PAPER PUBLISHED IN MARINE BIOTECHNOLOGY. Poster presentation at ISGA2015. Visit of Dr. Daniel de la Serrana, Scottish Oceans. Andrews, United Kingdom. Talk: "The impact of Whole Genome Duplications in the Biology of Fish". March 2015: NEW PAPER PUBLISHED IN PHYSIOLOGICAL GENOMCIS! October 2014: Visit of Prof. Jorge Fernandes, University of Nordland. New arrival of Medaka eggs. In the lab February 2014. First draft of the Teleost database " Fish-it. Poster presentation at the GIA2013.

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ANnOTATE

FISH-it presents a searchable teleost database for more than 20 fish transcriptomes. It aims to collect assembled data from fish species which are published in public repositories of mRNA, collections of expressed sequence tags, species specific transcriptome databases, as well as data retrieved from in-house sequences projects. Sequences can be searched via the site's Blast search which is being updated regularly. Search by Gene Name:. Search by Gene Accession No.:. For any questions or comments.

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