lncrnator.ewha.ac.kr

lncRNAtor

This site is optimized to browse in Chrome ! LncRNAtor aims to be the lncRNA (long non-coding RNA) portal encompassing expression profile, interacting (binding) protein, integrated sequence curation, evolutionary scores, and coding potential. Data sets were collected from TCGA, GEO, ENCODE, and modENCODE (Organism: Human, Mouse, Fly, Worm, and Yeast). Our system workflow is shown below. LncRNAtor version 1.0 released on Sept 2013. Representative features of lncRNAtor are summarized as follows:. Molecular...

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lncRNAtor | lncrnator.ewha.ac.kr Reviews

<META> DESCRIPTION

This site is optimized to browse in Chrome ! LncRNAtor aims to be the lncRNA (long non-coding RNA) portal encompassing expression profile, interacting (binding) protein, integrated sequence curation, evolutionary scores, and coding potential. Data sets were collected from TCGA, GEO, ENCODE, and modENCODE (Organism: Human, Mouse, Fly, Worm, and Yeast). Our system workflow is shown below. LncRNAtor version 1.0 released on Sept 2013. Representative features of lncRNAtor are summarized as follows:. Molecular...

<META> KEYWORDS

1 lncrna

2 coexpression

3 function

4 data browser

5 diff expr

6 protein

7 binding

8 cons and corr

9 about lncrnator

10 major feature

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lncrna,coexpression,function,data browser,diff expr,protein,binding,cons and corr,about lncrnator,major feature,and coding potential,2 expression analysis,and differential expression,3 functional analysis,in various conditions,4 protein binding analysis

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lncRNAtor | lncrnator.ewha.ac.kr Reviews

https://lncrnator.ewha.ac.kr

This site is optimized to browse in Chrome ! LncRNAtor aims to be the lncRNA (long non-coding RNA) portal encompassing expression profile, interacting (binding) protein, integrated sequence curation, evolutionary scores, and coding potential. Data sets were collected from TCGA, GEO, ENCODE, and modENCODE (Organism: Human, Mouse, Fly, Worm, and Yeast). Our system workflow is shown below. LncRNAtor version 1.0 released on Sept 2013. Representative features of lncRNAtor are summarized as follows:. Molecular...

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lncrnator.ewha.ac.kr

1

lncRNAtor Documentation

http://lncrnator.ewha.ac.kr/help.htm

1 Dataset and processing of NGS data. 22 Search result: Brief info. 23 Search result: Global Expr. 24 Search result: Diff. Expr. 25 Search result: Protein Int. 3 Coexpression and Function Menu. 31 Step1. Search. 32 Step2. Expression Heatmap. 33 Step3. Gene set analysis. 4 Data Browser and Diff. Expr. Menu. 41 Step1. Search. 42 Step2. Dataset Browser. 43 Step3. Differential Expression. 5 Protein Binding Menu. 51 Step1. Search. 52 Step2. Heatmap. 53 Step3. Sample information. 61 Step1. Search. Icon links t...

2

lncRNAtor Coexpression

http://lncrnator.ewha.ac.kr/proteinInteraction.htm

Gamma; RBPs Class. Gamma; RNA Binding Protein. Bull; Homo sapiens : microRNA‚ AGO2. Bull; Mus musculus : Epigenetic‚ Ezh2. Bull; Drosophila melanogaster : binding‚ elav. Heatmap for RNA-binding Proteins. CLIP-Seq adj. P-value. Diams; Sample Information. Designed by Free CSS Templates.

3

lncRNAtor Coexpression

http://lncrnator.ewha.ac.kr/CoexpressionRedef.htm

Gamma; Dataset title. Caenorhabditis elegans, C. elegans Dauer Developmental Stage. Caenorhabditis elegans, C. elegans N2 Early Embryo Developmental Stage. Caenorhabditis elegans, C. elegans Adult Developmental Stage. Danio rerio, Sanger Zebrafish Sequencing. Drosophila melanogaster, D. Melanogaster PolyA Developmental Stage. Homo sapiens, Ovarian serous cystadenocarcinoma: Person neoplasm cancer status. Homo sapiens, Ovarian serous cystadenocarcinoma: Tumor stage. Homo sapiens, Colon adenocarcinoma: Tum...

4

lncRNAtor Conserved HMZ

http://lncrnator.ewha.ac.kr/conservation.htm

Bull; Mammalian organs, Mus musculus‚ Mir17hg. Bull; Mouse ENCODE, Mus musculus‚ Mir22hg. Mammalian organs, Gallus gallus. Mammalian organs, Macaca mulatta. Mammalian organs, Monodelphis domestica. Mammalian organs, Mus musculus. Mammalian organs, Ornithorhynchus anatinus. Mammalian organs, Pan troglodytes. Mouse ENCODE, Mus musculus. Designed by Free CSS Templates.

5

lncRNAtor Browse

http://lncrnator.ewha.ac.kr/expression.htm

Bull; Drosophila melanogaster. Gamma; Data tree (Count of data sets). Gamma; Data sets. Brain lower grade glioma(4). Cervical squamous cell carcinoma and endocervical adenocarcinoma(4). Head and neck squamous cell carcinoma(7). Kidney renal clear cell carcinoma(9). Kidney renal papillary cell carcinoma(7). Lung squamous cell carcinoma(6). Uterine corpus endometrioid carcinoma(5). Chemotherapy and Hormone therapy(4). Bone Marrow Derived Macrophages(1). Dauer post-L1 stage larvae(1). Diams; Organism :.

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ercsb.ewha.ac.kr

ERCSB

http://ercsb.ewha.ac.kr/labboard/post/40

Cell and Molecular Biology. Redox and Proteome Research. Molecular and Genetic Development. 바이오 정보학 학위 과정. 이상혁 교수, miRseqViewer 논문 Bioinformatics 지에 온라인 게재 (10/15). 2014-10-17 17:53 written by admin. 차세대 시퀀싱 기술로 microRNA를 동정하는 miR-Seq 데이터를 분석하고 가시화하는 프로그램으로 miRSeqViewer를 개발하여. Impact Factor 5.323, SCI Mathematical and Computational Biology. MiRseqViewer는 microRNA 시퀀싱 데이터의 정렬 모습을 microRNA의 2차구조, read의 숫자와 함께 동시에 보여준다. 이를 통하여 microRNA의 processing 및 modification 과정을 real-time으로 쉽게 파악할 수 있는 장점을 지니고 있으며.

ercsb.ewha.ac.kr

ERCSB

http://ercsb.ewha.ac.kr/labboard/post/37

Cell and Molecular Biology. Redox and Proteome Research. Molecular and Genetic Development. 바이오 정보학 학위 과정. 이상혁 교수, lncRNAtor 논문 Bioinformatics 지에 온라인 게재 (5/9). 2014-05-13 16:29 written by admin. LncRNA (long noncoding RNA). Impact Factor 5.323, SCI Mathematical and Computational Biology. Http:/ bioinformatics.oxfordjournals.org/content/early/2014/05/09/bioinformatics.btu325.abstract. Http:/ lncrnator.ewha.ac.kr/. Sucofvcrfsz (tuehqg@rfycpp.com ) / 2016 04-28 16:19. A1t1yy a href=http:/ jibjnfcwfaei.c...

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The decade of exosomal long RNA species. The asymmetrically segregating lncRNA cherub is required for transforming stem cells into malignant cells. HLPI-Ensemble – Prediction of human lncRNA-protein interactions based on ensemble strategy. New lncRNA based fibromyalgia blood test boasts 94% accuracy. A cancer-associated SNP and its accompanying lncRNA induce malignancies via unique SNP-specific RNA mutations. Long noncoding RNA modulates treatment response in squamous cell carcinoma. Read More ». LncRNA ...

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lncRNAMap - The Map for studying Long Non-Coding RNAs

A resource of exploring long non-coding RNAs in human. Welcome to Functional Long Non-coding RNAs Database! VlncRNAs from Ensembl: 208. VlncRNAs from fsRNA: 49. GSM339994 reads: 13,869. GSM339995 reads: 11,883. GSM339996 reads: 1,786. HB reads: 5,026,203. HESE reads: 5,031,920. GSM531980 reads: 358,994. GSM531983 reads: 652,641. GSM531979 reads: 372,454. GSM531982 reads: 328,239. GSM531984 reads: 423,338. GSM531977 reads: 354,524. GSM531981 reads: 315,838. GSM531985 reads: 2,503,533.

lncrnator.ewha.ac.kr

lncRNAtor

This site is optimized to browse in Chrome ! LncRNAtor aims to be the lncRNA (long non-coding RNA) portal encompassing expression profile, interacting (binding) protein, integrated sequence curation, evolutionary scores, and coding potential. Data sets were collected from TCGA, GEO, ENCODE, and modENCODE (Organism: Human, Mouse, Fly, Worm, and Yeast). Our system workflow is shown below. LncRNAtor version 1.0 released on Sept 2013. Representative features of lncRNAtor are summarized as follows:. Molecular...

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