mibig.secondarymetabolites.org

MIBiG: Minimum Information about a Biosynthetic Gene cluster

The Minimum Information about a Biosynthetic Gene cluster (MIBiG) specification provides a robust community standard for annotations and metadata on biosynthetic gene clusters and their molecular products. MIBiG is a Genomic Standards Consortium project that builds on the Minimum Information about any Sequence (MIxS) framework. The JSON specifications of the MIBiG schema. Are freely available for download and can be used to validate MIBiG data from other sources. Comments or questions on MIBiG?

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MIBiG: Minimum Information about a Biosynthetic Gene cluster | mibig.secondarymetabolites.org Reviews

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The Minimum Information about a Biosynthetic Gene cluster (MIBiG) specification provides a robust community standard for annotations and metadata on biosynthetic gene clusters and their molecular products. MIBiG is a Genomic Standards Consortium project that builds on the Minimum Information about any Sequence (MIxS) framework. The JSON specifications of the MIBiG schema. Are freely available for download and can be used to validate MIBiG data from other sources. Comments or questions on MIBiG?

<META> KEYWORDS

1 repository

2 request accession

3 update

4 download

5 and options

6 actinorhodin

7 calcium dependent antibiotic

8 microbisporicin

9 and marneral

10 coupons

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repository,request accession,update,download,and options,actinorhodin,calcium dependent antibiotic,microbisporicin,and marneral

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MIBiG: Minimum Information about a Biosynthetic Gene cluster | mibig.secondarymetabolites.org Reviews

https://mibig.secondarymetabolites.org

The Minimum Information about a Biosynthetic Gene cluster (MIBiG) specification provides a robust community standard for annotations and metadata on biosynthetic gene clusters and their molecular products. MIBiG is a Genomic Standards Consortium project that builds on the Minimum Information about any Sequence (MIxS) framework. The JSON specifications of the MIBiG schema. Are freely available for download and can be used to validate MIBiG data from other sources. Comments or questions on MIBiG?

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mibig.secondarymetabolites.org

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MIBiG: Minimum Information about a Biosynthetic Gene cluster

http://mibig.secondarymetabolites.org/repository.html

This repository contains all complete and partial entries as of September 3rd, 2016. Full / partial MIBiG info. Oscillatoria sp. PCC 6506. Streptomyces sp. DSM 21069. Saccharopolyspora erythraea NRRL 2338. Aspergillus nidulans FGSC A4. Streptoalloteichus sp. ATCC 53650. Actinosynnema pretiosum subsp. pretiosum. Streptomyces sp. MP39-85. Aspergillus nidulans FGSC A4. Streptomyces sp. CS. Streptomyces carzinostaticus subsp. neocarzinostaticus. Streptomyces noursei ATCC 11455. Other / Polyketide / Saccharide.

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Minimum Information about a Biosynthetic Gene cluster: BGC0000315

http://mibig.secondarymetabolites.org/repository/BGC0000315/index.html

Minimum Information about a Biosynthetic Gene cluster. Download XLS overview file. Download EMBL summary file. Download GenBank summary file. Download MIBiG JSON file. Genomic loci for this biosynthetic pathway. The following clusters are from record BGC0000315.1:. BGC0000315, calcium-dependent antibiotic biosynthetic gene cluster from Streptomyces coelicolor. Locus 1. Full MIBiG entry. SMILES string: Copy to clipboard. Exact molecular mass: 1562.49 Da (M ). SMILES string: Copy to clipboard. Type I and II.

3

MIBiG: Minimum Information about a Biosynthetic Gene cluster

http://mibig.secondarymetabolites.org/index.html

The Minimum Information about a Biosynthetic Gene cluster (MIBiG) specification provides a robust community standard for annotations and metadata on biosynthetic gene clusters and their molecular products. MIBiG is a Genomic Standards Consortium project that builds on the Minimum Information about any Sequence (MIxS) framework. The JSON specifications of the MIBiG schema. Are freely available for download and can be used to validate MIBiG data from other sources. Comments or questions on MIBiG?

4

Minimum Information about a Biosynthetic Gene cluster: BGC0000194

http://mibig.secondarymetabolites.org/repository/BGC0000194/index.html

Minimum Information about a Biosynthetic Gene cluster. Download XLS overview file. Download EMBL summary file. Download GenBank summary file. Download MIBiG JSON file. Genomic loci for this biosynthetic pathway. The following clusters are from record BGC0000194.1:. BGC0000194, actinorhodin biosynthetic gene cluster from Streptomyces coelicolor. Locus 1. Full MIBiG entry. SMILES string: Copy to clipboard. Average molecular mass: 634.54044 Da. Polyketide synthase / ketosynthase-encoding genes:. 1 Taguchi T...

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Minimum Information about a Biosynthetic Gene cluster: BGC0000529

http://mibig.secondarymetabolites.org/repository/BGC0000529/index.html

Minimum Information about a Biosynthetic Gene cluster. Download XLS overview file. Download EMBL summary file. Download GenBank summary file. Download MIBiG JSON file. Genomic loci for this biosynthetic pathway. The following clusters are from record BGC0000529.1:. BGC0000529, microbisporicin biosynthetic gene cluster from Microbispora corallina. Locus 1. Full MIBiG entry. SMILES string: Copy to clipboard. Molecular formula: C94 H127 Cl N26 O26 S5. Exact molecular mass: 2232.95 Da (none). Naicons Srl and...

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Online documentation for the BiosynML project. Development of a versatile XML container format and tools to support bioinformatic analysis workflows in the field of genomics and secondary metabolite biosynthesis. It also provides a plugin for the widely used Geneious. Software to support biosynthetic gene cluster analysis and to interface with the popular antiSMASH. Platform. In addition, it serves as a bridge for gene cluster submissions using the MIBiG. Feature Prepare for MIBiG available.

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MIBiG: Minimum Information about a Biosynthetic Gene cluster

The Minimum Information about a Biosynthetic Gene cluster (MIBiG) specification provides a robust community standard for annotations and metadata on biosynthetic gene clusters and their molecular products. MIBiG is a Genomic Standards Consortium project that builds on the Minimum Information about any Sequence (MIxS) framework. The JSON specifications of the MIBiG schema. Are freely available for download and can be used to validate MIBiG data from other sources. Comments or questions on MIBiG?

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