mwdeem.rice.edu

Michael Deem's Research Group

Theoretical methods of statistical mechanics are developed and applied at Rice to study the collective properties of biological systems. Both computational and analytical methods are of interest. Natural systems from our world and engineered systems from biotechnology offer a wide variety of phenomena for study. New field-theoretic techniques, new computer simulation methods, and new random energy models have resulted. Current areas of interest include. Newton's laws of biology. Homepage for ZEFSA II.

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Michael Deem's Research Group | mwdeem.rice.edu Reviews

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Theoretical methods of statistical mechanics are developed and applied at Rice to study the collective properties of biological systems. Both computational and analytical methods are of interest. Natural systems from our world and engineered systems from biotechnology offer a wide variety of phenomena for study. New field-theoretic techniques, new computer simulation methods, and new random energy models have resulted. Current areas of interest include. Newton's laws of biology. Homepage for ZEFSA II.

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2 rice

3 university

4 postdoctoral positions available

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6 nterests

7 more information

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10 rice bioengineering

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Michael Deem's Research Group | mwdeem.rice.edu Reviews

https://mwdeem.rice.edu

Theoretical methods of statistical mechanics are developed and applied at Rice to study the collective properties of biological systems. Both computational and analytical methods are of interest. Natural systems from our world and engineered systems from biotechnology offer a wide variety of phenomena for study. New field-theoretic techniques, new computer simulation methods, and new random energy models have resulted. Current areas of interest include. Newton's laws of biology. Homepage for ZEFSA II.

INTERNAL PAGES

mwdeem.rice.edu

1

Michael Deem's Research

http://www.mwdeem.rice.edu/mwdeem

MICHAEL W. DEEM. John W. Cox Professor. 6100 Main Street - MS 142. Houston, TX 77005-1892. 713) 348-5811 (confidential fax). BS, California Institute of Technology (1991). PhD, University of California at Berkeley (1994). Postdoctoral Fellow, Harvard University (1995-1996). Awards, Honors, and Positions. November 1999) ( Profile. Alfred P. Sloan Research Fellow. 2000); Camille Dreyfus Teacher-Scholar Award. 2002); John W. Cox Professor, Rice University (2002-); Allan P. Colburn Award. 2009); BMES Represe...

2

Pepitope Calculator

http://www.mwdeem.rice.edu/pepitope

Calculator is an Excel file that can be used to calculate a specific measure of antigenic distance between two strains of influenza. It is freely distributed under the GNU General Public License. Is a variable that measures the antigenic distance between two influenza strains. P. Shows a better correlation with known vaccine efficacy data than do the variables that are currently being used by the CDC and the WHO. These include ferret assays (P. Described below) and illustrated how this P. Is as follows&#...

3

Multicanonical MD by a variable-temperature thermostat and variable-pressure barostat

http://www.mwdeem.rice.edu/tbstat

Multicanonical MD by a variable-temperature thermostat or variable-pressure barostat. The code is an enhanced sampling method for a flat-energy-distribution, or a flat-density-distribution, molecular dynamics simulation. It is freely distributed under the Lesser GNU Public License. Source code and usage. As the sampling weight. We here pursue the construction of multicanonical MD by using a variable temperature equal to β. Log Ω( E. We describe several thermostats to set this temperature. The method ...

4

ZEFSA II: Zeolite framework solution

http://www.mwdeem.rice.edu/zefsaII

ZEFSA is a software package capable of solving framework structures. It is freely distributed under the GNU Public License. Copying, using, and restrictions. Structures solved with the method. Deem Research Group Home Page.

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$fractalog.com$ fractalog.com

FractaLog - A non-linear space for students of Chaos and Fractals

http://www.fractalog.com/fractalog_blog?currentPage=5

Model-Predict-Understand.A non-linear space for students of Chaos and Fractals. A non-linear space for students of chaos and fractals. Modeling Acts of God, Part 2 - Earthquakes. Wednesday, July 11, 2007. This is #2 in a series. (Click here. For #1 on modeling hurricanes). Earthquake modeling seems to generate a wide range of emotions, vitriol, successes, and failures - so wide as to need a logarithmic scale, a la Richter. Click to read more . Constructal Theory of Everything? Sunday, July 8, 2007. Is ve...

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Alumni | Chandler Research Group

http://gold.cchem.berkeley.edu/The_Chandler_Group/alumni.html

Iris S. Antes. Iris was a Post-Doc in the Chandler Group during 2000 - 2002 and is currently a Professor at the Technical University Munich, Germany. For more details, please visit Iris' homepage. Joel S. Bader. Joel received his Ph. D. in the Chandler Group1991. He is currently a Professor at the Department of Biomedical Engineering at Johns Hopkins University . For more details, please visit Joel's homepage. Peter G. Bolhuis. Gavin E. Crooks. Felix S. Csajka. Michael W. Deem. Christoph was a Post-Doc i...

sustc-genome.org.cn

Jiankui He Lab

http://sustc-genome.org.cn/people.html

South University of Science and Technology of China. Postdoc research fellow, Stephen Quake lab. Stanford University, 2011. PhD, Rice University, 2010. BS, University of Science and Technology of China, 2006. Michael W. Deem. John W. Cox Professor. 6100 Main Street - MS 142. Houston, TX 77005-1892. Deem's lab wesite at Rice Univesity. Fellow, American Association for the Advancement of Science (AAAS). Fellow, American Physical Society (APS). Fellow, Biomedical Engineering Society (BMES).

ctbs.rice.edu

Speakers

http://ctbs.rice.edu/speakers.html

Gábor Balázsi, Ph.D. Associate Professor, Systems Biology. UT MD Anderson Cancer Center. Yaakov (Kobi) Benenson, Ph.D. Professor, Synthetic Biology. Michael Deem, Ph.D. John W. Cox Professor, Biochemical and Genetic Engineering, Professor of Physics and Astronomy. Oleg Igoshin, Ph.D. Associate Professor, Bioengineering. Cellular System Dynamics Group. Ilya Levental, Ph.D. Assistant Professor, Integrative Biology and Pharmacology. UT Health Science Center at Houston. Laboratory of Membrane Biology. Ted La...

evolution.rice.edu

Rice University Center for Evolution Directory

http://evolution.rice.edu/directory.html

Bennett , George. Biochemistry and Cell Biology. W200G George R Brown. Biochemistry and Cell Biology. W100C George R Brown. Biochemistry and Cell Biology. W200Q George R Brown. Deem, Michael W. Ecology and Evolutionary Biology. Ecology and Evolutionary Biology. Biochemistry and Cell Biology. Chemical Eng. and Bioengineering. W300E George R Brown. Biochemistry and Cell Biology. Ecology and Evolutionary Biology. Parry , Ron. E200D George R Brown Hall. Ecology and Evolutionary Biology. 101 A Anderson Biology.

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Member List

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Baylor College of Medicine. This email address is being protected from spambots. You need JavaScript enabled to view it. This email address is being protected from spambots. You need JavaScript enabled to view it. This email address is being protected from spambots. You need JavaScript enabled to view it. This email address is being protected from spambots. You need JavaScript enabled to view it. This email address is being protected from spambots. You need JavaScript enabled to view it. Eissa, N.Tony.

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mwdeem.rice.edu

Michael Deem's Research Group

Theoretical methods of statistical mechanics are developed and applied at Rice to study the collective properties of biological systems. Both computational and analytical methods are of interest. Natural systems from our world and engineered systems from biotechnology offer a wide variety of phenomena for study. New field-theoretic techniques, new computer simulation methods, and new random energy models have resulted. Current areas of interest include. Newton's laws of biology. Homepage for ZEFSA II.

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