neurodata.io

Neurodata

See our live demo of Science in the Cloud. Join us for our Brains and Bits NIPS Workshop. See our Intro Slides. The revolution in neuroscientific data acquisition is creating an analysis challenge. We leverage cloud-computing technologies to enable large-scale neurodata storing, exploring, analyzing, and modeling, empowering scientists globally to generate and test theories of brain function and dysfunction. Visit us at SfN. Kasthuri et al. (2015). Bock et al. (2011).

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Neurodata | neurodata.io Reviews

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See our live demo of Science in the Cloud. Join us for our Brains and Bits NIPS Workshop. See our Intro Slides. The revolution in neuroscientific data acquisition is creating an analysis challenge. We leverage cloud-computing technologies to enable large-scale neurodata storing, exploring, analyzing, and modeling, empowering scientists globally to generate and test theories of brain function and dysfunction. Visit us at SfN. Kasthuri et al. (2015). Bock et al. (2011).

<META> KEYWORDS

1 neurodata

2 data

3 tools

4 meet our team

5 enabling terascale neuroscience

6 why neurodata

7 spotlight

8 find us

9 to the cloud

10 featured data

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neurodata,data,tools,meet our team,enabling terascale neuroscience,why neurodata,spotlight,find us,to the cloud,featured data,view all data,featured tools,view all tools,alex baden,view all,community involvement,contribute,johns hopkins university,kavli

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Neurodata | neurodata.io Reviews

https://neurodata.io

See our live demo of Science in the Cloud. Join us for our Brains and Bits NIPS Workshop. See our Intro Slides. The revolution in neuroscientific data acquisition is creating an analysis challenge. We leverage cloud-computing technologies to enable large-scale neurodata storing, exploring, analyzing, and modeling, empowering scientists globally to generate and test theories of brain function and dysfunction. Visit us at SfN. Kasthuri et al. (2015). Bock et al. (2011).

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INTERNAL PAGES

neurodata.io

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Neurodata

https://neurodata.io/data/bock11

Bock et al. (2011). Network anatomy and in vivo physiology of visual cortical neurons. Bock et al., Nature 2011.

2

ndmg

https://neurodata.io/tools/ndmg

NeuroData's MRI Graphs Pipeline. NeuroData’s MR Graphs package, ndmg. Pronounced nutmeg ), is the successor of the MRCAP, MIGRAINE, and m2g pipelines. ndmg. Combines dMRI and sMRI data from a single subject to estimate a high-level connectome reliably and scalably. We are processing brain scans on an ongoing basis, and the resulting graphs are made available to the community through our graph database, MR-grutedb. Here are a few guides to help you get started playing with ndmg. Generate your brain graphs.

3

Neurodata

https://neurodata.io/about

Our goal is to work together with neuroexperimentalists to discover fundamental principles governing the relationship between mind and brain, via building and deploying open source data-driven tools that run at scale on open access data. This includes analytics, databases, cloud computing, and Web-services applied to both big neuroimages and big neurographs. References: Neurodata Mendeley Group. Genetic Engineering and Biotechnology News: Best of the Web: Open Connectome Project.

4

Neurodata

https://neurodata.io/data

Our goal is to work together with neuroexperimentalists to discover fundamental principles governing the relationship between mind and brain, via building and deploying open source data-driven tools that run at scale. Ohyama et al. (2015). Bhatia et al. (2015). Bloss et al. (2016). Bock et al. (2011). Bumbarger et al. (2013). Collman et al. (2015). Jarrell et al. (2016). Kasthuri et al. (2015). Harris et al. (2015). Kristina et al. (2015). Lee et al. (2016). Randlett et al. (2015). Tobin et al. (2016).

5

Neurodata

https://neurodata.io/data/kasthuri15

Kasthuri et al. (2015). Bobby Kasthuri, Ph.D. under the tutelage of Jeff Lichtman, M.D., Ph.D., acquired a data set from mouse cortex with a 3x3x30 cubic nanometer spatial resolution, yielding 660GB of images. This beautiful data was published Friday, July 30th 2015 in Cell. Saturated Reconstruction of a Volume of Neocortex. Saturated Reconstruction of a Volume of Neocortex. We describe automated technologies to probe the structure of neural tissue at nanometer resolution .

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neurodark.com

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Welcome to my little slice of the cosmic radio. Neurodark music is found here. Sit a bit. Chillax. Blow out your windows. I added a new track called 'Sex Ranger' for you guys to check out. This song was recorded in real time, in one take. Share this track (Hide). Join the mailing list for the latest news and a free track!

neurodata.io

Neurodata

See our live demo of Science in the Cloud. Join us for our Brains and Bits NIPS Workshop. See our Intro Slides. The revolution in neuroscientific data acquisition is creating an analysis challenge. We leverage cloud-computing technologies to enable large-scale neurodata storing, exploring, analyzing, and modeling, empowering scientists globally to generate and test theories of brain function and dysfunction. Visit us at SfN. Kasthuri et al. (2015). Bock et al. (2011).

neurodata.net

Neurodata.net - Home Page

Intraoperative monitoring has become the standard of care during many orthopedic, neurological and vascular surgical procedures. Unlike other techniques such as x-rays, fluoroscope or ultrasound, which only give pictures of anatomical structures, "NEURO DATA" utilizes IOM to provide real time information to the surgical team regarding the functional integrity of the nervous system and related structures. Efficacy - Why do YOU need us. While NEURO DATA technologists are obtaining critical data throughout ...

neurodata.org

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neurodatabase.org

BrainML Data Repository

Welcome to the BrainML Data Server at Neurodatabase.org. This site hosts a public neurophysiology database. You may access the database, contribute to it, or learn more about it here. Use the links at left to navigate. Click on the logo at top left or use the "back" button to return to this page. July 25, 2007. December 15, 2006. Open Source Version 1.0 released. You may now download the source code for the repository and web start applications at neurodatabase.org here. May 31, 2006. April 6, 2006.

neurodatabase.otago.ac.nz

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neurodatawithoutborders.github.io

Neurodata Without Borders: Neurophysiology File Format

The Neurodata Without Borders: Neurophysiology. NWB") format is designed to store a variety of neurophysiology data, including from intracellular and extracellular electrophysiology experiments, optical physiology experiments, as well as tracking and stimulus data. The NWB format is implemented in the Hierarchical Data Format (HDF5). And a MATLAB API. Are provided for data publishers. Files are generated using HDF5, so the HDFView. Application can be used to view content, and a HDF5 library, such as h5py.