phaster.ca
PHASTERPhaster
http://www.phaster.ca/
Phaster
http://www.phaster.ca/
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PHASTER | phaster.ca Reviews
https://phaster.ca
Phaster
phaster.ca
PHASTER
http://phaster.ca/instructions
About arrow drop down. About arrow drop down. How to use this server. Step 1: Click on the tab with the action you would like to perform. There are 3 options:. Upload your GenBank formatted file or FASTA DNA sequence file. If you upload a FASTA file containing metagenomic contigs, you may check the option directly below the "Choose File" button. The server will process your metagenomic input and return results pertaining to each contig. Please upload a multi-fasta file with this option! Once the file upl...
PHASTER
http://phaster.ca/input
About arrow drop down. About arrow drop down. Reference Input File Format. Raw Nucleotide Sequence Data Format. Gi 16445223 ref NC 002655.2 Escherichia coli O157:H7 str. EDL933 chromosome, complete genome AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTCTCTGACAGCAGC TTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAA TATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCATTAGCACCACC ATTACCACCACCATCACCACCACCATCACCATTACCATTACCACAGGTAACGGTGCGGGCTGACGCGTAC AGGAAACACAGA...Unkno...
PHASTER
http://phaster.ca/statistics
About arrow drop down. About arrow drop down. If you use the results of PHASTER, please cite the following:. Arndt, D., Grant, J., Marcu, A., Sajed, T., Pon, A., Liang, Y., Wishart, D.S. (2016) "PHASTER: a better, faster version of the PHAST phage search tool", Nucleic Acids Research (submitted). Reference Tables and Figures. Table 1: PHASTER’s performance upgrades. Table 2: Feature comparison between PHAST and PHASTER. Figure 1: Contig length and sensitivity. Table 3: PHASTER evaluation (summary). Smart...
PHASTER
http://phaster.ca/output
About arrow drop down. About arrow drop down. Image in circular format :. Image in linear format :. Please contact us using our feedback form.
PHASTER
http://phaster.ca/submissions
About arrow drop down. About arrow drop down. This is a list of all the genomes from NCBI. That have already been analyzed with PHASTER. Populus trichocarpa linkage group LGII, whole genome shotgun. Oryctolagus cuniculus breed Thorbecke inbred chromosome 21,. Beutenbergia cavernae DSM 12333, complete genome. Mycobacterium indicus pranii MTCC 9506, complete genome. Listeria monocytogenes strain R2-502, complete genome. Pasteurella multocida subsp. multocida str. Anand1 goat, whole. Candidatus Symbiobacter...
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PHAST
http://phast.wishartlab.com/index.html
PHASTER, a new version of PHAST is available HERE! Please cite the following: You Zhou, Yongjie Liang, Karlene Lynch, Jonathan J. Dennis, David S. Wishart “PHAST: A Fast Phage Search Tool” Nucl. Acids Res. (2011) 39(suppl 2): W347-W352 [doi:10.1093/nar/gkr485][PMID:21672955]. News and Updates, Nov 10, 2014 ( especially for contig files. Please input a Genbank accession number. Or a GI number. For example, NC 000913 or 49175990). Select your GenBank formatted file. Select your nucleotide sequence file.
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PHASTER
About arrow drop down. About arrow drop down. Elease) is a significant upgrade to the popular PHAST. Have lots of sequences to run? Try our URL API. Please cite the following:. Arndt, D., Grant, J., Marcu, A., Sajed, T., Pon, A., Liang, Y., Wishart, D.S. (2016) PHASTER: a better, faster version of the PHAST phage search tool. Nucleic Acids Res., 2016 May 3. Select an input type:. Upload a GenBank formatted file or nucleotide sequence file (FASTA format). See an example GenBank file.
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