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Predictor of Natural Disordered Regions (PONDR)Predictor of Natural Disordered Regions. If you experience any problems, please e-mail.
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Predictor of Natural Disordered Regions. If you experience any problems, please e-mail.
http://www.pondr.com/
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Predictor of Natural Disordered Regions (PONDR) | pondr.com Reviews
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Predictor of Natural Disordered Regions. If you experience any problems, please e-mail.
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Predictor of Naturally Disordered Regions - disorder protein predictor
http://www.pondr.com/pondr-tut2.html
Predictor Of Naturally Disordered Regions. Predicts upon single sequences. PONDRs are typically feedforward neural networks that use sequence attributes taken over windows of 9 to 21 amino acids. These attributes, such as the fractional composition of particular amino acids, hydropathy, or sequence complexity, are averaged over these windows and the values are used to train the neural network during predictor construction. The same values are used as inputs to make predictions. For short (8 - 9 residues).
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Unidad de Bioinformatica CBMSO
https://ub.cbm.uam.es/home/links.php
Structural stability of ecological systems. Proteomics research: http:/ www.proteomicsresearch.org. Phyre: http:/ www.sbg.bio.ic.ac.uk/ phyre/. Fugue: http:/ www-cryst.bioc.cam.ac.uk/ fugue/. Robetta: http:/ robetta.bakerlab.org/. BlastProfiler: http:/ manaslu.aecom.yu.edu/blastprofiler.html. Hamap: http:/ trantor.bioc.columbia.edu/hmap/index.html. Mammoth: http:/ ub.cbm.uam.es/servers/mammoth/mammoth.php. Mammoth-mult: http:/ ub.cbm.uam.es/servers/mammoth/mammothmult.php.
Disprot - Database of Protein Disorder
http://www.disprot.org/predictors.php
Xue, B., R. L. DunBrack, R.W. Williams, A.K. Dunker, and V. N. Uversky (2010) "PONDR-Fit: A meta-predictor of intrinsically disordered amino acids." Biochim. Biophys. Acta 1804(4):996-1010. Internal pointer to the PONDR-FIT meta-predictor and other PONDR methods. Linding R, Jensen LJ, Diella F, Bork P, Gibson TJ, Russell RB. "Protein disorder prediction: implications for structural proteomics." Structure. 2003;11(11):1453-9. Dosztanyi Z, Csizmok V, Tompa P, Simon I. "IUPred: web server for the predic...
Disorder
http://www.d2p2.pro/about/predictors
Details on the predictors included in the database, both protein structure and disorder. Algorithm authorship is stated where necessary, as well as a contact details for all data providers. Search Instead ». This page contains brief descriptions of the predictors included in the D. If you have any specific comments or issues with a given predictors assignments a point of contact for that data provision is linked. For more general enquiries or comments please contact Matt Oates. Li,X, Romero,P. Genome Inf...
新井研究室 / リンク
http://folding.c.u-tokyo.ac.jp/links.html
Clustal Omega (seq align). Clustal W/X (seq align). Contact order (Baker lab). ATSAS (SAXS, EMBL). SAngler (SAXS, KEK-PF). Proc Natl. Acad. Sci. USA. J Am Chem. Soc. Protein Eng. Des. Sel. J Biol. Chem. Nature Struct. Mol. Biol. Biochem Biophys Res Comm. Nature Chem. Biol. J Biochem. (1922-2004). J Biomol. NMR. Wright, P. E. (Scripps). Dyson, H. J. (Scripps). Matthews, C. R. (U Mass). Bilsel, Osman (U Mass). Baker, David (U Washington).
Protein disorder prediction: Implications for structural proteomics
http://dis.embl.de/html/paper.html
Protein disorder prediction: Implications for structural proteomics. Toby J. Gibson. And Robert B. Russell. EMBL - Biocomputing Unit. D-69117 Heidelberg, Germany. Max-Delbrück-Centre für Molecular Medicine. D-13092 Berlin, Germany. D-69117 Heidelberg, Germany. Dagger; These authors contributed equally. To whom correspondence should be addressed (email: linding@embl.de). IDPs - Intrinsically Disordered Proteins. ELMs - Eukaryotic Linear Motifs. PONDR - Predictor Of Natural Disordered Regions. In the post-...
Disprot - Database of Protein Disorder
http://disorder.compbio.iupui.edu/predictors.php
Xue, B., R. L. DunBrack, R.W. Williams, A.K. Dunker, and V. N. Uversky (2010) "PONDR-Fit: A meta-predictor of intrinsically disordered amino acids." Biochim. Biophys. Acta 1804(4):996-1010. Internal pointer to the PONDR-FIT meta-predictor and other PONDR methods. Linding R, Jensen LJ, Diella F, Bork P, Gibson TJ, Russell RB. "Protein disorder prediction: implications for structural proteomics." Structure. 2003;11(11):1453-9. Dosztanyi Z, Csizmok V, Tompa P, Simon I. "IUPred: web server for the predic...
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We are a new director duo spawned from an old friendship. Scroll down to see our work. Post Production: Adam Lyons. Durex – Too Close. Production Company: Sweet Media. Production Designer: Steve Kingston. Art Director: James Donnelly. Producer: TJ O’ Grady – Peyton. Exec Producer: Emile Rafael. Record Label: Defected Records. Art Directior/Animator: Neal Coghlan. Editor: Jack Singer @ Cut and Run. Music by: Colonel Red. Performed by: Chima Akenzua. Editor: John O’ Connor. 1st AD: Stephen Sheehy.
Predictor of Natural Disordered Regions (PONDR)
Predictor of Natural Disordered Regions. If you experience any problems, please e-mail.
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Predictor of Natural Disordered Regions (PONDR)
Predictor of Natural Disordered Regions. If you experience any problems, please e-mail.
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