programmingforbiologists.org programmingforbiologists.org

programmingforbiologists.org

· Programming for Biologists

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). This is the website for Ethan White’s programming and database management courses designed for biologists. At the moment there are four courses being taught during Fall 2014. Introduction to Programming for Biologists. Introduction to Database Management for Biologists. Computational Biology Research Project. Advanced Computing for Biologists.

http://www.programmingforbiologists.org/

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CONTACTS AT PROGRAMMINGFORBIOLOGISTS.ORG

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Ethan White

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Ethan White

16●● E

Lo●●an , UT, 84341

US

1.43●●●●1909
ep●●●●●●●@gmail.com

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Ethan White

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Lo●●an , UT, 84341

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ep●●●●●●●@gmail.com

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· Programming for Biologists | programmingforbiologists.org Reviews
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Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). This is the website for Ethan White’s programming and database management courses designed for biologists. At the moment there are four courses being taught during Fall 2014. Introduction to Programming for Biologists. Introduction to Database Management for Biologists. Computational Biology Research Project. Advanced Computing for Biologists.
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2 programming
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5 exercises
6 assignments
7 and data carpentry
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· Programming for Biologists | programmingforbiologists.org Reviews

https://programmingforbiologists.org

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). This is the website for Ethan White’s programming and database management courses designed for biologists. At the moment there are four courses being taught during Fall 2014. Introduction to Programming for Biologists. Introduction to Database Management for Biologists. Computational Biology Research Project. Advanced Computing for Biologists.

INTERNAL PAGES

programmingforbiologists.org programmingforbiologists.org
1

About · Programming for Biologists

http://www.programmingforbiologists.org/about

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). Praise for the class.

2

Intro to Databases for Biologists · Programming for Biologists

http://www.programmingforbiologists.org/databases

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). Intro to Databases for Biologists. Instructor: Dr. Ethan White.

3

Exercises · Programming for Biologists

http://www.programmingforbiologists.org/exercises

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). Databases 1 - Creating. Databases 2 - Importing. Databases 3 - Selecting. Databases 4 - Filtering. Databases 5 - Sorting. Databases 6 - Grouping. Databases 7 - Grouping. Databases 8 - Aggregation. Databases 9 - Aggregation. Databases - Forms 1. Databases - Forms 2. Databases - Forms 3. Databases - Joins 1. Databases - Joins 2. Databases - Joins 3. Databases - Joins 4. Databases - Nested Queries 1.

4

Intro to Programming for Biologists · Programming for Biologists

http://www.programmingforbiologists.org/programming

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). Intro to Programming for Biologists. Instructor: Dr. Ethan White.

5

Advanced Computing for Biologists · Programming for Biologists

http://www.programmingforbiologists.org/advanced

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). Advanced Computing for Biologists. Instructor: Dr. Ethan White.

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weecology.org weecology.org

Members | Weecology

http://www.weecology.org/members

My research focuses on data-intensive questions in ecology, using large ecological datasets, advanced statistical/machine learning methods, and theoretical modeling to understand ecological patterns. I am a Moore Investigator in Data-Driven Discovery. Am active on Twitter. Blog about ecology and open science. And serve on the Data Carpentry. Boards of directors, the Software Carpentry. Advisory board, and the editorial boards of PLOS One and PeerJ. Checkout my Impactstory. Ellen joined the lab in fall of...

whitelab.weecology.org whitelab.weecology.org

Data Carpentry: Workshops to Increase Data Literacy for Researchers | The White Lab

http://whitelab.weecology.org/node/241

Data Carpentry: Workshops to Increase Data Literacy for Researchers. Data Carpentry: Workshops to Increase Data Literacy for Researchers. Teal TK, Cranston KA, Lapp H, White E, Wilson G, Ram K, Pawlik A. International Journal of Digital Curation. A strong test of the Maximum Entropy Theory of Ecology. Data Carpentry: Workshops to Increase Data Literacy for Researchers. Exploring the spatially explicit predictions of the Maximum Entropy Theory of Ecology.

whitelab.weecology.org whitelab.weecology.org

Grants | The White Lab

http://whitelab.weecology.org/grants

We believe that open science includes being open about the work that we're doing in addition to the work we have already done. As part of this effort we are starting to share the proposals that fund our research and our reports on our progress. Moore Foundation Data Driven Discovery Investigators Competition. Annual Report 2010 - 2011. Annual Report 2011 - 2012. NSF Research Starter Grant. NSF Postdoctoral Fellowship in Biological Informatics. A strong test of the Maximum Entropy Theory of Ecology.

weecology.org weecology.org

Publications | Weecology

http://www.weecology.org/publications

McGlinn DJ, Xiao X, Kitzes J, White EP. 2015 Exploring the spatially explicit predictions of the Maximum Entropy Theory of Ecology. Global Ecology and Biogeography. 24(6):675-684. Xiao X, Locey KJ, White EP. 2015 A Process-Independent Explanation for the General Form of Taylor’s Law. Teal TK, Cranston KA, Lapp H, White E, Wilson G, Ram K, Pawlik A. 2015 Data Carpentry: Workshops to Increase Data Literacy for Researchers. International Journal of Digital Curation. 10(1). Xiao X, White EP, McGlinn DJ.

weecology.org weecology.org

Software | Weecology

http://www.weecology.org/software

To help improve ecologists ability to quickly access and analyze data we are developing a computer program called the EcoData Retriever. That designs database structures for ecological datasets and then downloads the data, pre-processes it, and installs it into major database management systems. Find out more. An R wrapper for the EcoData Retriever developed as part of the rOpenSci. Project. On GitHub. Rpartitions: Code for integer partitioning. Fitting power-law distributions to data.

weecology.org weecology.org

| Weecology

http://www.weecology.org/node

An Amniote Life History Database to Perform Comparative Analyses with Birds, Mammals, and Reptiles. Fri, 09/04/2015 - 11:08 Morgan Ernest. Myhrvold NP, Baldridge E, Chan B, Sivam D, Freeman DL, Ernest SKM. 2015 An Amniote Life History Database to Perform Comparative Analyses with Birds, Mammals, and Reptiles. Using life history trade-offs to understand core-transient structuring of a small mammal community. Fri, 09/04/2015 - 11:06 Morgan Ernest. Supp SR, Koons D, Ernest SKM. Supp SR, Ernest SKM. Explorin...

weecology.org weecology.org

Data Carpentry: Workshops to Increase Data Literacy for Researchers | Weecology

http://www.weecology.org/node/241

Data Carpentry: Workshops to Increase Data Literacy for Researchers. Wed, 06/17/2015 - 12:15 Ethan White. Data Carpentry: Workshops to Increase Data Literacy for Researchers. Teal TK, Cranston KA, Lapp H, White E, Wilson G, Ram K, Pawlik A. International Journal of Digital Curation. Using life history trade-offs to understand core-transient structuring of a small mammal community. An Amniote Life History Database to Perform Comparative Analyses with Birds, Mammals, and Reptiles.

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· Programming for Biologists

Teaching biologists the tools they need to use computers to do cool science. Fork My Course (GitHub). This is the website for Ethan White’s programming and database management courses designed for biologists. At the moment there are four courses being taught during Fall 2014. Introduction to Programming for Biologists. Introduction to Database Management for Biologists. Computational Biology Research Project. Advanced Computing for Biologists.

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