rpredictor.ms.mff.cuni.cz
home | rPredictorPrediction of secondary RNA structures and complex search of both primary and secondary RNA structures
http://rpredictor.ms.mff.cuni.cz/
Prediction of secondary RNA structures and complex search of both primary and secondary RNA structures
http://rpredictor.ms.mff.cuni.cz/
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Prediction of secondary RNA structures and complex search of both primary and secondary RNA structures
rpredictor.ms.mff.cuni.cz
predict | rPredictor
http://rpredictor.ms.mff.cuni.cz/predict
To find out about how the prediction tools work, read the docs for Cp-predict. Ribosomal RNA secondary structures database - RSS channel.
download | rPredictor
http://rpredictor.ms.mff.cuni.cz/download
Here you can download complete data from our database. Download either whole database dump. Or one of the three CSV packages. Complete documentation of the database structure can be found in our documentation. The CSV packages contains complete record information including cp-predict prediction for each record. You can download those packages here:. You can read more about the data in our documentation. You can also download cp-predict utility. Ribosomal RNA secondary structures database - RSS channel.
1. rWeb Tutorial — rPredictor 1.0 documentation
http://rpredictor.ms.mff.cuni.cz/documentation/rDoc-User/rWebTutorial.html
RPredictor 1.0 documentation. 1 rPredictor User Documentation. The website is known to work for the major browsers in their current version: Mozilla Firefox, Internet Explorer (10 ) and Google Chrome. The website offers two functionalities:. Of secondary structure. Since both are only loosely related, we’ll give a separate tutorial for each. Only the “Search” and “Predict” pages offer site functionalities, so the tutorial will focus exclusively on them. The most important part of the documentation is.
rPredictor — rPredictor 1.0 documentation
http://rpredictor.ms.mff.cuni.cz/documentation
RPredictor 1.0 documentation. 1 rPredictor User Documentation. 5 Database record information (Sequence detail). 8 RF-predict: Basic prediction algorithm. 9 CP-predict: Custom rRNA prediction algorithm. 2 rPredictor Technical Documentation. 3 rPredictor data and database. 4 rETL: getting data. 6 Creating your own tool. 7 Creating your own analytical model. 8 Database queries using DbTool. 9 CP-predict: setup and customization. Get started right away with the. RPredictor is a project dedicated to. Gene tra...
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| SIRET Research Group
http://siret.ms.mff.cuni.cz/projects
Similarity is our job. Software tool for exploration of the chemical space). Https:/ www.assembla.com/spaces/molpher/. Among main features, Molpher offers optimized parallel exploration algorithm, compound logging, dimension-reduced visualization of chemical space and interactive widget-based GUI. Codebase is extensible in terms of additional morphing operators, chemical fingerprints, similarity measures and visualization strategies to allow further experiments. Protein structure similarity search).
SIRET Research Group | Similarity is our job.
http://siret.ms.mff.cuni.cz/home
Similarity is our job. SImilarity RETrieval) research group ( SRG. Was founded in 2006 at the Department of Software Engineering, Faculty of Mathematics and Physics, Charles University in Prague. SRG deals with database methods for efficient and effective similarity search. Jedna noc s informatikou a matematikou. Jakub Lokoč: Vyhledávání ve videu. Jeden den s informatikou (2015). David Hoksza: Využití metod strojového učení v bioinformatice. Http:/ siret.ms.mff.cuni.cz/cbmi2015/. At the Klagenfurt Univer...
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The rDB contains 592.514. Last Mirrored SILVA release:. Is a bioinformatic infrastructure for prediction, analysis and storage of secondary structures of ribosomal RNAs. It includes a ribosomal RNA (rRNA) structure prediction engine based on the cppredict algorithm, a database of rRNA secondary structures and rRNA structure analysis tools accessible through this website. The complete documentation including a tutorial. Is available from a separate documentation page. The project is a part of the ELIXIR CZ.
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