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UbPred: predictor of protein ubiquitination sites

UbPred: predictor of protein ubiquitination sites. Paste the protein sequence (one at a time):. Or upload a sequence file:. UbPred is a random forest-based predictor of potential ubiquitination sites in proteins. It was trained on a combined set of 266 non-redundant experimentally verified ubiquitination sites available from our experiments and from two large-scale proteomics studies (Hitchcock, et al. 2003; Peng, et al. UbPred executable files are available for download:.

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UbPred: predictor of protein ubiquitination sites. Paste the protein sequence (one at a time):. Or upload a sequence file:. UbPred is a random forest-based predictor of potential ubiquitination sites in proteins. It was trained on a combined set of 266 non-redundant experimentally verified ubiquitination sites available from our experiments and from two large-scale proteomics studies (Hitchcock, et al. 2003; Peng, et al. UbPred executable files are available for download:.
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UbPred: predictor of protein ubiquitination sites | ubpred.org Reviews

https://ubpred.org

UbPred: predictor of protein ubiquitination sites. Paste the protein sequence (one at a time):. Or upload a sequence file:. UbPred is a random forest-based predictor of potential ubiquitination sites in proteins. It was trained on a combined set of 266 non-redundant experimentally verified ubiquitination sites available from our experiments and from two large-scale proteomics studies (Hitchcock, et al. 2003; Peng, et al. UbPred executable files are available for download:.

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UbPred: predictor of protein ubiquitination sites

http://www.ubpred.org/help.html

UbPred: predictor of protein ubiquitination sites. The input to UbPred is a protein sequence in FastA format, which can be pasted into the text box, or uploaded as a file. Only the 20 conventional amino acid symbols are supported; entering one of the ambiguous symbols (BJOUXZ) will produce an error. The sequence should be 25 or more residues long and should contain at least one lysine (K). Due to the limited computational resources, we allow prediction of only one sequence per user at a time. 2003), our ...

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9658; 2. Tendency Graphs1. Polar%, Nonpolar%, Charged%, Acidic%, Basic%, GRAVY, pI, Transmembrane, S-S bonds, Domain linker. 9658; 3. Tendency Graphs2. Secondary structure, Solvent accessibility, Low complexity%, Disorder%, Ubiquitination, N-glycosylation, O-glycosylation, PDB. 1 Statistics of Records. Number of Records (All Data). Subcellular loc (TargetP) . Subcellular loc (WoLF) . Rosetta Stone Proteins (All Data). Average of Records (All Data). Beta; sheet%. Number of Records (Unannotated Data).

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InterPro in 2011: new developments in the family and domain prediction database. 40, 306–312 (2012). DROP: an SVM domain linker predictor trained with optimal features selected by random forest. 27, 487–494 (2010). Plant-specific glycosylation patterns in the context of therapeutic protein production. 8, 564–587 (2010). Identification, Analysis and Prediction of Protein Ubiquitination Sites. 78, 365–380 (2010). Christophe N. Magnan. SOLpro: accurate sequence-based prediction of protein solubility. Automa...

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UbPred: predictor of protein ubiquitination sites

UbPred: predictor of protein ubiquitination sites. Paste the protein sequence (one at a time):. Or upload a sequence file:. UbPred is a random forest-based predictor of potential ubiquitination sites in proteins. It was trained on a combined set of 266 non-redundant experimentally verified ubiquitination sites available from our experiments and from two large-scale proteomics studies (Hitchcock, et al. 2003; Peng, et al. UbPred executable files are available for download:.

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