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Unipept is an open source web application developed at Ghent University. That is designed for metaproteomics data analysis with a focus on interactive datavisualizations. Unipept is powered by an index containing all UniProt entries, a tweaked version of the NCBI taxonomy and a custom lowest common ancestor. Algorithm. This combination enables a blazingly fast biodiversity analysis. Of large and complex metaproteome samples. And for comparing genomes. Based on peptide similarity. Update 3.1.3. Will be ca...

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Home | Unipept | unipept.ugent.be Reviews

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Unipept is an open source web application developed at Ghent University. That is designed for metaproteomics data analysis with a focus on interactive datavisualizations. Unipept is powered by an index containing all UniProt entries, a tweaked version of the NCBI taxonomy and a custom lowest common ancestor. Algorithm. This combination enables a blazingly fast biodiversity analysis. Of large and complex metaproteome samples. And for comparing genomes. Based on peptide similarity. Update 3.1.3. Will be ca...

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Home | Unipept | unipept.ugent.be Reviews

https://unipept.ugent.be

Unipept is an open source web application developed at Ghent University. That is designed for metaproteomics data analysis with a focus on interactive datavisualizations. Unipept is powered by an index containing all UniProt entries, a tweaked version of the NCBI taxonomy and a custom lowest common ancestor. Algorithm. This combination enables a blazingly fast biodiversity analysis. Of large and complex metaproteome samples. And for comparing genomes. Based on peptide similarity. Update 3.1.3. Will be ca...

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unipept.ugent.be

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Unipept API | Unipept

http://unipept.ugent.be/apidocs

Most of the peptide analysis workflows provided by Unipept are available as web services. This page contains the documentation on how to use these services. Based and always returns JSON. Objects as response. There are five basic methods:. Returns the set of UniProt entries containing a given tryptic peptide. Returns the set of taxa extracted from the UniProt entries containing a given tryptic peptide. Returns the taxonomic lowest common ancestor for a given tryptic peptide. Mesuere et al. (2015) Pro...

2

Publications | Unipept

http://unipept.ugent.be/publications

This page lists all Unipept peer-reviewed journal articles in reverse-chronological order. Unipept Web Services for Metaproteomics Analysis. Bart Mesuere, Toon Willems, Felix Van der Jeugt, Bart Devreese, Peter Vandamme, and Peter Dawyndt. And are open sourced under the MIT license. Bart Mesuere, Toon Willems, Felix Van der Jeugt, Bart Devreese, Peter Vandamme, and Peter Dawyndt. Unipept Web Services for Metaproteomics Analysis. The Unipept Metaproteomics Analysis Pipeline.

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Unipept

http://unipept.ugent.be/posts

Unipept 3.1 includes these major updates:. A faster peptidome analysis based on UniProt proteomes. An updated database based on UniProt 2015.12. Update 3.1.3. Update to UniProt 2016.05. Check the release notes. For a full list of changes. Unipept 3.1 changelog. Unipept 3.1 consists of 84 commits and 75 changed files with 1,158 additions and 921 deletions. This includes these updates:. UniProt proteomes as data source for the peptidome analysis instead of assemblies. Rails to 4.2.5. UniProt to 2016.01.

4

Unique Peptide Finder | Unipept

http://unipept.ugent.be/peptidefinder

The (tryptic) peptidome is the complete set of (tryptic) peptides encoded in the proteome of an organism. Unipept provides fast and flexible analysis tools for identifying the unique peptidome of a given taxon and peptidome-based clustering. Sorry, your browser doesn't seem to support the File API. Everything should work find in Firefox or Google Chrome. Add your own proteomes. Add your own proteome. Resume your previous analysis? Sort by peptidome size. Optimize pan and core. Incremental unions and inte...

5

Peptidome Analysis | Unipept

http://unipept.ugent.be/peptidome

The (tryptic) peptidome is the complete set of (tryptic) peptides encoded in the proteome of an organism. Unipept provides fast and flexible analysis tools for identifying the unique peptidome of a given taxon and peptidome-based clustering. Sorry, your browser doesn't seem to support the File API. Everything should work find in Firefox or Google Chrome. Add your own proteomes. Add your own proteome. Resume your previous analysis? Sort by peptidome size. Optimize pan and core. Incremental unions and inte...

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proteomicsnews.blogspot.com

News in Proteomics Research: UniPept -- a CompOmics resource for metaproteomics!

http://proteomicsnews.blogspot.com/2017/01/unipept-compomics-resource-for.html

News in Proteomics Research. Wednesday, January 11, 2017. UniPept - a CompOmics resource for metaproteomics! CompOmics is churning out awesome tools for our community faster than I can keep track of them. Somehow, unsurprisingly, I completely missed that they've got a full metaproteomics pipeline up. You can check out UniPept here! Wait- -I just wasted all my coffee time playing with the clustering tool - this is unbelievable. How did I not know about this? This tool is brilliant - absurdly powerful - an...

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unipept.ugent.be

Home | Unipept

Unipept is an open source web application developed at Ghent University. That is designed for metaproteomics data analysis with a focus on interactive datavisualizations. Unipept is powered by an index containing all UniProt entries, a tweaked version of the NCBI taxonomy and a custom lowest common ancestor. Algorithm. This combination enables a blazingly fast biodiversity analysis. Of large and complex metaproteome samples. And for comparing genomes. Based on peptide similarity. Update 3.1.3. Will be ca...

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