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vertibase.org

VertiBase.org

A collection of model organism databases of metabolic pathways, including reactions, enzymes, genes and substrate compounds

http://www.vertibase.org/

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VertiBase.org | vertibase.org Reviews
<META>
DESCRIPTION
A collection of model organism databases of metabolic pathways, including reactions, enzymes, genes and substrate compounds
<META>
KEYWORDS
1 metabolism
2 pathways
3 metabolic
4 enzymes
5 compounds
6 reactions
7 biochemical
8 bioinformatics
9 model organism database
10 genes
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vertibase org,why login,create new account,logged in as,my preferences,email,no account,create one,searching,change organism database,project,project description,organisms,used tools,workshops,compounds,genes/proteins/rnas,reactions,pathways,advanced
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VertiBase.org | vertibase.org Reviews

https://vertibase.org

A collection of model organism databases of metabolic pathways, including reactions, enzymes, genes and substrate compounds

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vertibase.org vertibase.org
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VertiBase.org - The Verticillium Database

http://www.vertibase.org/Project/resourcesAnnotation.php

Resources for Manual Annotation. Genome Browser (Uni Greifswald). Web Site Usage Guide. Resources for the annotation. Available resources for the annotation:. Annotation Summary Verticillium longisporum. SummaryAnnotation au16 2012-10-05.xlsx. SummaryAnnotation au16 2012-09-19.xlsx. SummaryAnnotation au16 2012-09-05.xlsx. 43 au17 to au16. Vlongisporum-43 au17.mapping to au16.long 2012-08-29.xlsx. Vlongisporum-43 au16.genes with alternative transcripts 2012-08-29.csv. Saccharomyces Genome Database (SGD).

2

VertiBase.org - The Verticillium Database

http://www.vertibase.org/Project/tools.php

Resources for Manual Annotation. Genome Browser (Uni Greifswald). Web Site Usage Guide. Resources for the annotation. BioFung - Verticillium longisporum. References of used tools. Automatic annotation pipeline scheme. SignalP v. 3.0. Improved prediction of signal peptides: SignalP 3.0. Jannick Dyrløv Bendtsen, Henrik Nielsen, Gunnar von Heijne and Søren Brunak. J. Mol. Biol., 340:783-795, 2004. SignalP v. 4.0. Predicting transmembrane protein topology with a hidden markov model: application to complete g...

3

VertiBase.org - The Verticillium Database

http://www.vertibase.org/Project

Resources for Manual Annotation. Genome Browser (Uni Greifswald). Web Site Usage Guide. Resources for the annotation. BioFung Database (VertiBase) is designed for genomics and the analysis of metabolic pathway database. Multiple V. longisporum. Genomes and other previously sequenced Verticillium. Of the Federal Ministry of Education and Research ( BMBF. Species are pathogens of over 300 important sub-tropical or temperate crops. Verticillium longisporum. The genome of V. longisporum. Appears to be an int...

4

VertiBase.org - The Verticillium Database

http://www.vertibase.org/locationMapping

Resources for Manual Annotation. Genome Browser (Uni Greifswald). Web Site Usage Guide.

5

VertiBase.org - The Verticillium Database

http://www.vertibase.org/Project/organisms.php

Resources for Manual Annotation. Genome Browser (Uni Greifswald). Web Site Usage Guide. Resources for the annotation. Strains sequenced by the BioFung project. Strain 43 and 32. Strains VL43 and VL32 were isolated in 1988 and 1990 from Brassica napus. Oilseed rape, Canola) in Mecklenburg, Germany ( Zeise and Tiedemann, 2002. VL43 is highly virulent on Brassica napus. Whereas VL32 shows only slight symptoms on the host-plant. In 2011, the first records of Verticillium. Strain VaMs.102 (haploid) was is...

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Keep me logged in. Why Create an Account? Web site accounts provide several benefits. Through your account you can:. Customize the appearance of pages on this Web site. Store organism sets for comparative operations. Configure default settings for the Omics Viewers. Receive important email updates about this Web site. Resources for Manual Annotation. Genome Browser (Uni Greifswald). Web Site Usage Guide. Genomes and other previously sequenced Verticillium. For annotators is available too. Appears to be a...

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