ancora.genereg.net

Ancora

This site is devoted to the study of highly conserved noncoding elements. HCNEs) in metazoan genomes. We identify HCNEs as non-exonic regions of high similarity between genome sequences from distantly related organisms, such as human and fish, and provide tools for studying the distribution of HCNEs along chromosomes. Ancora is maintained by Boris Lenhard's research group. At MRC Clinical Sciences Centre. Questions and comments can be sent to ge.tan09 at imperial.ac.uk. Browse HCNEs on the genome of:.

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Ancora | ancora.genereg.net Reviews

<META> DESCRIPTION

This site is devoted to the study of highly conserved noncoding elements. HCNEs) in metazoan genomes. We identify HCNEs as non-exonic regions of high similarity between genome sequences from distantly related organisms, such as human and fish, and provide tools for studying the distribution of HCNEs along chromosomes. Ancora is maintained by Boris Lenhard's research group. At MRC Clinical Sciences Centre. Questions and comments can be sent to ge.tan09 at imperial.ac.uk. Browse HCNEs on the genome of:.

<META> KEYWORDS

1 welcome to ancora

2 dog canfam3

3 horse equcab2

4 chicken galgal4

5 zebrafish danrer7

6 tetraodon tetnig2

7 d melanogaster dm3

8 c elegans ce10

9 a oryzae rib40

10 download hcne data

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welcome to ancora,dog canfam3,horse equcab2,chicken galgal4,zebrafish danrer7,tetraodon tetnig2,d melanogaster dm3,c elegans ce10,a oryzae rib40,download hcne data,methods and references

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Ancora | ancora.genereg.net Reviews

https://ancora.genereg.net

This site is devoted to the study of highly conserved noncoding elements. HCNEs) in metazoan genomes. We identify HCNEs as non-exonic regions of high similarity between genome sequences from distantly related organisms, such as human and fish, and provide tools for studying the distribution of HCNEs along chromosomes. Ancora is maintained by Boris Lenhard's research group. At MRC Clinical Sciences Centre. Questions and comments can be sent to ge.tan09 at imperial.ac.uk. Browse HCNEs on the genome of:.

INTERNAL PAGES

ancora.genereg.net

1

Zebrafish (danRer7): 2.84 Mbp from chr17:8,230,000..11,069,999

http://ancora.genereg.net/cgi-bin/gbrowse/danRer7

Dump selection as FASTA. Submit selection to UCSC BLAT. Submit selection to NCBI BLAST. Zebrafish July 2010 (zv9) assembly. Help with this browser. Show my user ID. Log in / create account. Zebrafish (danRer7): 2.84 Mbp from chr17:8,230,000.11,069,999. Configure. Cave fish HCNEs. Configure. Chicken HCNEs. Configure. Common Carp HCNEs. Configure. Elephant Shark HCNEs. Configure. Frog HCNEs. Configure. Fugu HCNEs. Configure. Grass Carp HCNEs. Configure. Human HCNEs. Configure. Medaka HCNEs.

2

D. melanogaster (dm3): 300 kbp from chr2R:13,000,001..13,300,000

http://ancora.genereg.net/cgi-bin/gbrowse/dm3

D melanogaster April 2006 assembly. Help with this browser. Show my user ID. Log in / create account. D melanogaster (dm3): 300 kbp from chr2R:13,000,001.13,300,000. Chr3R:12,450,001.12,700,000. Configure. D. ananassae HCNEs. Configure. D. mojavensis HCNEs. Configure. D. pseudoobscura HCNEs. Configure. D. virilis HCNEs. Configure. G. morsitans HCNEs. Configure. G. morsitans PreBlat HCNEs. Configure. Musca domestica HCNEs. Show Active Tracks Only. G morsitans PreBlat HCNEs. There are no tracks yet.

3

A. oryzae_RIB40: 1 Mbp from Chr1_A_oryzae_RIB40:1,000,000..2,000,000

http://ancora.genereg.net/cgi-bin/gbrowse/RIB40

Aspergillus oryzae Mar 2006 assembly. Help with this browser. Show my user ID. Log in / create account. A oryzae RIB40: 1 Mbp from Chr1 A oryzae RIB40:1,000,000.2,000,000. Chr3 A oryzae RIB40. Configure. A fumigatus Af293 HCNEs. Configure. A nidulans FGSC A4 HCNEs. Configure. A niger CBS 513 88 HCNEs. A nidulans FGSC A4 HCNEs. A fumigatus Af293 HCNEs. A niger CBS 513 88 HCNEs. Show Active Tracks Only. A nidulans FGSC A4 HCNEs. A fumigatus Af293 HCNEs. A niger CBS 513 88 HCNEs. There are no tracks yet.

4

Tetraodon (tetNig2): 1 Mbp from chr5:6,200,001..7,200,000

http://ancora.genereg.net/cgi-bin/gbrowse/tetNig2

Dump selection as FASTA. Submit selection to UCSC BLAT. Submit selection to NCBI BLAST. Tetraodon March 2010 assembly. Help with this browser. Show my user ID. Log in / create account. Tetraodon (tetNig2): 1 Mbp from chr5:6,200,001.7,200,000. Configure. Elephant Shark HCNEs. Configure. Fugu HCNEs. Configure. Human HCNEs. Configure. Medaka HCNEs. Configure. Mouse HCNEs. Configure. Spotted Gar HCNEs. Configure. Stickleback HCNEs. Configure. Zebrafish HCNEs. Show Active Tracks Only. There are no tracks yet.

5

Human (hg19): 2.25 Mbp from chr11:30,697,925..32,947,924

http://ancora.genereg.net/cgi-bin/gbrowse/hg19

Human February 2009 assembly. Help with this browser. Show my user ID. Log in / create account. Human (hg19): 2.25 Mbp from chr11:30,697,925.32,947,924. Chr1:211,000,000.220,000,000. Configure. Chicken HCNEs. Configure. Dog HCNEs. Configure. Elephant Shark HCNEs. Configure. Frog HCNEs. Configure. Fugu HCNEs. Configure. Horse HCNEs. Configure. Lizard HCNEs. Configure. Medaka HCNEs. Configure. Mouse HCNEs. Configure. Opossum HCNEs. Configure. Platypus HCNEs. Configure. Rhesus HCNEs. Show 2.25 Mbp.

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zf-health.org

ZF-HEALTH

http://www.zf-health.org/data/databases.html

Databases developed by ZF-HEALTH partners. Several project partners are in the process of developing databases for release of high-throughput data from the ZF-HEALTH project:. The European Zebrafish Resource Center. Has established a public database of available mutant stocks (WP1) which can be immediately requested through a link through the model organism database, ZFIN. On the project website. Website provides 4D digital reconstructions of developing embryos (WP2). Addditionally, mutant data (WP1) are...

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ancora.genereg.net

Ancora

This site is devoted to the study of highly conserved noncoding elements. HCNEs) in metazoan genomes. We identify HCNEs as non-exonic regions of high similarity between genome sequences from distantly related organisms, such as human and fish, and provide tools for studying the distribution of HCNEs along chromosomes. Ancora is maintained by Boris Lenhard's research group. At MRC Clinical Sciences Centre. Questions and comments can be sent to ge.tan09 at imperial.ac.uk. Browse HCNEs on the genome of:.

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