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Biomedical Natural Language Processing Research Group at UMass

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Biomedical Natural Language Processing Research Group at UMass
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Biomedical Natural Language Processing Research Group at UMass

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1

BioNOT

https://bio-nlp.org/index.php/projects/bionot

Written by Elaine Freund. On 23 March 2015. BioNOT is a searchable database of negated biomedical sentences (1). It consists of more than 58 million negated sentences from over 500 million indexed sentences and was built using the open source negation scope detection alorithm, NegScope (2). The BioNOT database The BioNOT system was tested by looking at negated relations between genes and three genetic disorders (autism, Alzhiemer's disease and Parkinson's disease). Search powered by Lucene.

2

Project

https://bio-nlp.org/index.php/projects

Click the project images to go to the application page! Patient access to physicians' notes has the potential to improve understanding, medication adherence and healthcare outcomes. However, EHR notes contain medical jargon that may be difficult for patients to comprehend. To improve patients’ EHR note comprehension, we have developed NoteAid, a biomedical natural language processing system which translates medical jargon into consumer-oriented lay language. Read more: ADE Repository. BioRover extracts r...

3

Annotation

https://bio-nlp.org/index.php/annotation

Written by Elaine Freund. On 23 February 2015. To Annotate for the Adverse Drug Event Detection for Pharmacovigilance project you will need to access Electronic Health Records (EHR) data. Since the records are from patients and contain personally identifiable information, you must complete CITI training and fill out user agreements. Use University of Massachusetts Medical School, Worcester as your institution. This work is licensed under a Creative Commons Attribution 4.0 license. Below are hyperlinks to...

4

Publications

https://bio-nlp.org/index.php/publications

Written by Super User. On 12 February 2015. Next, you can embed. This page using one of several options. To the site owner:. Mendeley is changing its API. In order to keep using Mendeley with BibBase past April 14th, you need to:. Renew the authorization for BibBase on Mendeley, and. Update the BibBase URL in your page the same way you did when you initially set up this page. Bidirectional RNN for Medical Event Detection in Electronic Health Records. NAACL HLT 2016. Abhyuday Jagannatha; and Hong Yu.

5

AskHERMES

https://bio-nlp.org/index.php/projects/askhermes

Written by Super User. On 22 April 2015. Physicians and healthcare providers have many questions when seeing patients and there is limited time and resources to search for answers to these questions. AskHERMES is a computational system that uses natural language processing approaches to automatically analyze large sets of documents pertaining to specific questions and generates short text from them as output. Like it on Facebook, 1 on Google, Tweet it or share this article on other bookmarking websites.

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cssi.umass.edu cssi.umass.edu

Computational Social Science Institute – UMass Amherst – Home

http://cssi.umass.edu/index.html

Computational Social Science Institute. The UMass Computational Social Science Institute is a diverse interdisciplinary community using computational models and methods to help us understand the social world. The Institute promotes dialog and collaboration across our 68 faculty affiliates from 23 departments in 9 colleges at the University of Massachusetts. Paul M. Collins, Jr. Civil and Environmental Engineering. Health Promotion and Policy. Mechanical and Industrial Engineering. Justin H. Gross.

cssi.umass.edu cssi.umass.edu

Computational Social Science Institute – UMass Amherst – Home

http://cssi.umass.edu/people.html

Computational Social Science Institute. Justin H. Gross. Mark C. Pachucki. Center for Public Policy and Administration. N366 Integrative Learning Center. Paul M. Collins, Jr. 226 South College Building. National Center for Public Policy and Administration. Civil and Environmental Engineering. Health Promotion and Policy. Seth K. Goldman. N370 Integrative Learning Center. Mechanical and Industrial Engineering. Center for Public Policy and Administration. David E. Huber. Psychological and Brain Sciences.

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BookFactory® Lab Notebooks, Log Books and Engineering Notesbooks

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NLP Challenges for Detecting Medication and Adverse Drug Events from Electronic Health Records. Professor Hong Yu is the Principal Investigator of the University of Massachusetts Medical School's Biomedical Informatics Natural Language Processing (UMMS BioNLP) Group. To learn more about. Prof Hong Yu, she. And her group members are featured on the.

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BIO-NMD- Home

EU REPORTING FOR PARTNERS. Bridging basic research and clinical research with the aim of discovering and validating biomarkers for neuromuscular disease. BIO-NMD is an EU-funded project devoted to the discovery and validation of biomarkers in muscle dystrophies with the aim of improving disease and therapy monitoring. It is a translational project which will focus on Duchenne and collagen VI myopathies. Dr Matteo Bovolenta presents to Biomarker Industry Representatives. More translations now available.

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Bio-NMR

PosPap. for Stakeholders. PosPap. Comput. Biology. The project @ M36. Facing Challenges - Video. Awards for Graduate Students. Pulse Sequences and Software. Bio-NMR position paper for stakehorders:. To see the document. Bio-NMR position paper on computational biology:. To see the document. Into a coherent research community prepared to tackle scientific and biomedical challenges of increasing complexity at the forefront of research worldwide. For further information on how to apply. About the Bio-NMR con...

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Laboratory of Biomolecular NMR - Saint Petersburg State University

Laboratory of Biomolecular NMR. Saint Petersburg State University. Dynamics in protein crystals: insights from MD simulations complement new solid-state NMR and X-ray data. Posted: 03.09.2016. O N Rogacheva , S. A. Izmailov , V. Kurauskas , A. Shilova , P. Ma, Y. Xue, N. Coquelle, J. D. Haller, T. Yuwen, I. Ayala, A. Hessel, J. Woodhouse, O. Mikhailovskii, D. Willbold, J. Colletier, N. R. Skrynnikov, P. Schanda. Suppl 1), 237 (2016). DOI: 10.1111/febs.13808. XXXVIII Finnish NMR Symposium. To answer this ...

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Willkommen bei Bio Noah

Willkommen bei Bio Noah. Neu: Bald gibt es den Film zu sehen, hir ein Teaser zum Gusto holen. Der Film hat eine Länge von ca 30min. https:/ www.youtube.com/watch? NEU NEU NEU NEU NEU NEU NEU! D: http:/ youtu.be/KZU5PWrv5xM. ENGL: http:/ youtu.be/Q6RPXBtGgdI. RO: http:/ youtu.be/ghg7btz1xHo. Gönn dir ein Stück vom Schweineglück. Genuss Festival 09-11. Mai 2014 in Wien. Bio Noah am Bauernmarkt in. Linzerstr 404 - im Fuhrmannhaus. 2-4 Oktober, 6-8 November, 12-14 Dezember. Do 900 - 18.00 Uhr.

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