blog.phytools.org

Phylogenetic Tools for Comparative Biology

Phylogenetic Tools for Comparative Biology. Thursday, March 15, 2018. More on morphing a cladogram into phylomorphospace. A function to animation the projection of a phylogeny into so-called phylomorphospace. Basically the function morphs a cladogram into morphospace. I have now updated. This function and added it to the phytools. Package so it can be obtained merly by updating phytools. From GitHub using devtools. The update consisted of doing a few things:. Which I intend to add as an option later.

http://blog.phytools.org/

OVERVIEW OF blog.phytools.org

TRAFFIC RANK

>1,000,000

REVIEWS

0

PAGES IN THIS WEBSITE

20

LINKS TO THIS WEBSITE

CONTACTS

ADDRESSES

SOCIAL LINKS

ONLINE SINCE

WEBSITE DETAILS

SEO

PAGES

SIMILAR SITES

TRAFFIC RANK FOR BLOG.PHYTOOLS.ORG

TODAY'S RATING

>1,000,000

TRAFFIC RANK - AVERAGE PER MONTH

BEST MONTH

April

AVERAGE PER DAY Of THE WEEK

HIGHEST TRAFFIC ON

Wednesday

TRAFFIC BY CITY

Sign up

CUSTOMER REVIEWS

Average Rating: 3.9 out of 5 with 17 reviews

5 star

7

4 star

5

3 star

3

2 star

0

1 star

2

Hey there! Start your review of blog.phytools.org

AVERAGE USER RATING

Write a Review

WEBSITE PREVIEW

LOAD TIME

1.5 seconds

FAVICON PREVIEW

16x16

CONTACTS AT BLOG.PHYTOOLS.ORG

ADD CONTACT

Login

TO VIEW CONTACTS

Remove Contacts

FOR PRIVACY ISSUES

CONTENT

PAGES IN
THIS WEBSITE

20

SSL

EXTERNAL LINKS

106

SITE IP

172.217.6.83

LOAD TIME

1.48 sec

SCORE

6.2

PAGE TITLE

Phylogenetic Tools for Comparative Biology | blog.phytools.org Reviews

<META> DESCRIPTION

Phylogenetic Tools for Comparative Biology. Thursday, March 15, 2018. More on morphing a cladogram into phylomorphospace. A function to animation the projection of a phylogeny into so-called phylomorphospace. Basically the function morphs a cladogram into morphospace. I have now updated. This function and added it to the phytools. Package so it can be obtained merly by updating phytools. From GitHub using devtools. The update consisted of doing a few things:. Which I intend to add as an option later.

<META> KEYWORDS

1 pages

2 phytools page

3 phytools on cran

4 lab webpage

5 yesterday i posted

6 par new=true

7 the internally used

8 phylomorphospace

9 heres a demo

10 tree

CONTENT

Page content here

KEYWORDS ON PAGE

pages,phytools page,phytools on cran,lab webpage,yesterday i posted,par new=true,the internally used,phylomorphospace,heres a demo,tree,as follows,0 comments,email this,blogthis,share to twitter,share to facebook,share to pinterest,kinda neat,stands for m

SERVER

GSE

CONTENT-TYPE

utf-8

GOOGLE PREVIEW

Phylogenetic Tools for Comparative Biology | blog.phytools.org Reviews

https://blog.phytools.org

Phylogenetic Tools for Comparative Biology. Thursday, March 15, 2018. More on morphing a cladogram into phylomorphospace. A function to animation the projection of a phylogeny into so-called phylomorphospace. Basically the function morphs a cladogram into morphospace. I have now updated. This function and added it to the phytools. Package so it can be obtained merly by updating phytools. From GitHub using devtools. The update consisted of doing a few things:. Which I intend to add as an option later.

INTERNAL PAGES

blog.phytools.org

1

Phylogenetic Tools for Comparative Biology: August 2014

http://blog.phytools.org/2014_08_01_archive.html

Phylogenetic Tools for Comparative Biology. Friday, August 29, 2014. Counting edges from a Newick string. I just posted a new phytools source build ( phytools 0.4-32. Featuring the newly updated. Is a simple tree-reading function - basically redundant with. In the ape package, but slightly more tolerant of "badly conformed" Newick strings. Unfortunately, it is quite slow - although some improvements. To the code have dramatically decreased run-time for the function. As it uses the same basic structure.

2

Phylogenetic Tools for Comparative Biology: December 2014

http://blog.phytools.org/2014_12_01_archive.html

Phylogenetic Tools for Comparative Biology. Friday, December 26, 2014. Wrapper function to optimize the λ tree transformation for a discrete trait. To an R-sig-phylo query. By posting some code to optimize Pagels λ tree transformation for a discrete character evolving by a continuous-time Markov chain. I did this by writing a very simple wrapper around apes. Function for ancestral character estimation, which also fits this model:. Note that the same model can also be fit using geigers. This latest versio...

3

Phylogenetic Tools for Comparative Biology: Comments

http://blog.phytools.org/p/comments.html

Phylogenetic Tools for Comparative Biology. This page is for general comments about the blog. Please feel free to post suggestions, questions, or comments about the blog material, my R functions page, or phylogenetic comparative methods generally. August 24, 2011 at 8:51 AM. October 3, 2011 at 6:23 PM. So far as I can tell, the above comment is spam - but since it is the only one Ive got (as of 10/3/2011) on a whole page dedicated to comments, I have chosen to leave it up. September 28, 2012 at 5:42 PM.

4

Phylogenetic Tools for Comparative Biology: Bug fix for phenogram when ftype="off"

http://blog.phytools.org/2015/05/bug-fix-for-phenogram-when-ftypeoff.html

Phylogenetic Tools for Comparative Biology. Tuesday, May 19, 2015. Bug fix for phenogram when ftype="off". In developing an exercise recently, I discovered a small bug that was introduced into the function. When I changed (in the latest phytools) version the optional argument. This bug causes the function to crash if labels are turned off using. Under the default conditions. Heres how it manifests using simulated tree and data:. Phenogram(tree,x,ftype=off) # doesnt work. OK, thats it for now. Subscribe t...

5

Phylogenetic Tools for Comparative Biology: Robinson-Foulds distance and NNI

http://blog.phytools.org/2013/02/robinson-foulds-distance-and-nni.html

Phylogenetic Tools for Comparative Biology. Wednesday, February 6, 2013. Robinson-Foulds distance and NNI. A colleague just asked me:. Do you know of a way in R to calculate the topological difference between 2 trees as the. Ed minimum) number of nearest-neighbor interchanges required to go from one to the other? And then compute RF distance for each tree (using phangorn: RF.dist. Here is the result:. One random NNI step. 1] 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20 20. This will eventually even...

UPGRADE TO PREMIUM TO VIEW 15 MORE

TOTAL PAGES IN THIS WEBSITE

20

LINKS TO THIS WEBSITE

maojf.blogspot.com

evolving all we are: SysCall - Distinguishing heterozygous sites from systematic errors

http://maojf.blogspot.com/2013/11/syscall-distinguishing-heterozygous.html

Evolving all we are. SysCall - Distinguishing heterozygous sites from systematic errors. Http:/ bio.math.berkeley.edu/SysCall/. SysCall is a logistic regression based classifier. Given a list of candidate heterozygous genomic locations and a sam file of sequenced reads SysCall classifies each genomic location as either a heterozygous site or a systematic error and outputs according lists, along with the assigned posterior probabilities. The submitted manuscript describing SysCall can be found here. On th...

maojf.blogspot.com

evolving all we are: De Novo Transcriptome Assembly with Trinity: Protocol and Videos

http://maojf.blogspot.com/2013/11/de-novo-transcriptome-assembly-with.html

Evolving all we are. De Novo Transcriptome Assembly with Trinity: Protocol and Videos. Http:/ gettinggeneticsdone.blogspot.com/2013/10/de-novo-transcriptome-assembly-trinity.html. 订阅：帖子评论 (Atom). List of Bioinformatics Workshops and Training Reso. A Mitochondrial Manhattan Plot. SysCall - Distinguishing heterozygous sites from s. PubMed Commons: One post-publication peer review f. Useful Unix/Linux One-Liners for Bioinformatics. De Novo Transcriptome Assembly with Trinity: Proto. Beware of the snail.

muenkemueller.de

Tamara Münkemüller - links

http://www.muenkemueller.de/links.html

Uuml;nkemüller - L. A network of young modellers in ecology - http:/ www.yomos.de. A platform for sharing published data and code - http:/ datadryad.org. A platform for collecting information on tools in ecology and evolution - http:/ www.etoology.net. Theoretical Ecology Blog - Florian Hartig. Beautiful graphics in R - R Graph Gallery. A collection of code and tips and tricks - R-leca. Phylogenetics in R - Wiki. Phylogenetics in R - Blog by Liam Revell.

maojf.blogspot.com

evolving all we are: PubMed Commons: One post-publication peer review forum to rule them all?

http://maojf.blogspot.com/2013/11/pubmed-commons-one-post-publication.html

Evolving all we are. PubMed Commons: One post-publication peer review forum to rule them all? Http:/ gettinggeneticsdone.blogspot.com/2013/10/pubmed-commons-post-publication-peer-review.html. 订阅：帖子评论 (Atom). List of Bioinformatics Workshops and Training Reso. A Mitochondrial Manhattan Plot. SysCall - Distinguishing heterozygous sites from s. PubMed Commons: One post-publication peer review f. Useful Unix/Linux One-Liners for Bioinformatics. De Novo Transcriptome Assembly with Trinity: Proto. A massive h...

maojf.blogspot.com

evolving all we are: A Mitochondrial Manhattan Plot

http://maojf.blogspot.com/2013/11/a-mitochondrial-manhattan-plot.html

Evolving all we are. A Mitochondrial Manhattan Plot. A Mitochondrial Manhattan Plot. Http:/ gettinggeneticsdone.blogspot.com/2013/11/a-mitochondrial-manhattan-plot.html. 订阅：帖子评论 (Atom). List of Bioinformatics Workshops and Training Reso. A Mitochondrial Manhattan Plot. SysCall - Distinguishing heterozygous sites from s. PubMed Commons: One post-publication peer review f. Useful Unix/Linux One-Liners for Bioinformatics. De Novo Transcriptome Assembly with Trinity: Proto. In case any of you are hitting er...

maojf.blogspot.com

evolving all we are: 2013年龙星计划之生物信息学

http://maojf.blogspot.com/2013/09/2013.html

Evolving all we are. Day 1 Background. Basic Statistics. Introduce deep sequencing data. Motivational examples. Day 2 Analyze RNA-seq data and small RNA-seq data. Day 3 DNA methylation, Integration with other data types. Day 4 Analyze ChIP-seq data on transcription factors and histone modifications. Integration with other sequencing data types. Day 5 Analyze DNase-seq data and MNase-seq data. Integration with other data types. Day 3 Analyze RNA-seq data and small RNA-seq data. 订阅：帖子评论 (Atom). Image: D3 ...

maojf.blogspot.com

evolving all we are: BroadE Workshop 2013 July 9-10

http://maojf.blogspot.com/2013/09/broade-workshop-2013-july-9-10.html

Evolving all we are. BroadE Workshop 2013 July 9-10. Http:/ www.broadinstitute.org/gatk/guide/events? This workshop covered the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the “Best Practices” developed by the GATK team. View the. To learn why each step is essential to the calling process, what are the key operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. A Tale about ...

maojf.blogspot.com

evolving all we are: Whoiam

http://maojf.blogspot.com/p/my-cv.html

Evolving all we are. 订阅：帖子 (Atom). List of Bioinformatics Workshops and Training Reso. A Mitochondrial Manhattan Plot. SysCall - Distinguishing heterozygous sites from s. PubMed Commons: One post-publication peer review f. Useful Unix/Linux One-Liners for Bioinformatics. De Novo Transcriptome Assembly with Trinity: Proto. Nothing in biology makes sense! Beware of the snail. Have you recently flown into the US from abroad? A Tale about Two Tails: No Effect of Having a Regrown Tail on Body Condition.

UPGRADE TO PREMIUM TO VIEW 98 MORE

TOTAL LINKS TO THIS WEBSITE

106

OTHER SITES

blog.physis.jp

t2雑記

Http:/ www.hobbystock.jp/i.php? Posted by t2 at 23:40 Comment(87). Function dotted($x0, $y0, $x1, $y1){. 160; global $pdf;. 160; $w = 0.5; #線を引く長さ. 160; $s = 0.2; #空白の長さ. 160; $pdf- SetLineWidth(0.0875);. 160; # 縦. 160; if ($x0 = $x1){. 160; $y = $y0;. 160; while ($y $y1){. 160; $y0 = $w;. 160; if ($y0 $y1) { $y0 = $y1;}. 160; $pdf- Line($x0, $y, $x0, $y0); . 160; $y = $w;. 160; . 160; }. 160; }. 160; . 160; }. Posted b...

blog.physissda.com.br

Physis SDA

18 de jan de 2013. Conheça nosso novo blog! O blog da Physis SDA mudou! Para visualizar as novidades e continuar acompanhando as notícias, acesse:. Arte criada por Agência Ubick. Postado por Vitor Yuki. Links para esta postagem. 13 de nov de 2012. Physis SDA no Esquadrão Verde Tang - Olimpíadas de Reciclagem. Postado por Vitor Yuki. Links para esta postagem. 25 de out de 2012. Muitos já nos enviaram e-mails perguntando sobre o site da Physis, os posts no nosso blog e as novidades, pois estivemos um pouco...

blog.phyto-compagnon.com

Blog - Phyto Compagnon : Phytothérapie 100% naturelle pour les animaux ( Chien, Chat, Lapin, Oiseau, ... )

Peut-on sortir un chiot avant ses derniers vaccins? Le mal des transports. Peut-on sortir un chiot avant ses derniers vaccins? Danielle Mirat le 29/06/2011. En ne sortant pas le chiot très tôt, il y a plus à craindre de ne pas initier une bonne socialisation au milieu extérieur, plutôt qu’à le maintenir à l’intérieur pour le préserver des infections possibles. Afficher le(s) commentaire(s) sur cet article. Commentaire(s) sur cet article :. Le 19/03/2018 - 07:39. Cialis professional canadian pharmacy.

blog.phytofrance.net

PHYTOFRANCE ★ LE BLOG DE ZUSHI

Zushi Paris Natural Style. PHYTOFRANCE LE BLOG DE ZUSHI. レノアレッポリキッドソープ LAINO Savon liquide d'Alep 500ml. フィトラックソワスプレー(つや出し効果お買得2個セット Phytolaque Soie Spray 100ml lot2. フィトデフリサントリートメント Phytodéfrisant 100ml. ラロッシュポゼCCクリーム Rosaliac CC Creme SPF30-50ml. CCクリームラロッシュポゼ ROSALIAC はSPF30。

blog.phytonatura.com

アロマテラピーとハーブの専門店　　　　　　フィトナチューラ

アロマテラピー検定1級 2級の受験申込は2018年3月22日木と. 交通アクセス地下鉄南北線自衛隊前駅から徒歩２３分. TEL 011 841 1448. FAX: 011- 850 -9033. 営業時間 10:00 18:00 店舗定休日なし. Http:/ www.phytonatura.com. Posted by: アロマテラピーとハーブの専門店フィトナチューラ. 沐浴法の全身浴法では、精油合計1 ５滴、または精油を混ぜた天然塩. 交通アクセス地下鉄南北線自衛隊前駅から徒歩２３分. TEL 011 841 1448. FAX: 011- 850 -9033. 営業時間 10:00 18:00 店舗定休日なし. Http:/ www.phytonatura.com. Posted by: アロマテラピーとハーブの専門店フィトナチューラ. 交通アクセス地下鉄南北線自衛隊前駅から徒歩２３分. TEL 011 841 1448. FAX: 011- 850 -9033. 営業時間 10:00 18:00 店舗定休日なし. TEL 011 841 1448.

blog.phytools.org

Phylogenetic Tools for Comparative Biology

Phylogenetic Tools for Comparative Biology. Thursday, March 15, 2018. More on morphing a cladogram into phylomorphospace. A function to animation the projection of a phylogeny into so-called phylomorphospace. Basically the function morphs a cladogram into morphospace. I have now updated. This function and added it to the phytools. Package so it can be obtained merly by updating phytools. From GitHub using devtools. The update consisted of doing a few things:. Which I intend to add as an option later.

blog.phyxo.net

Phyxo

Dimanche, 23 novembre, 2014. Et encore un sous-domaine. Le Dimanche, 23 novembre, 2014, 18h35 - Général. Le service de téléchargement. Le site de présentation. Voici désormais le site des extensions. Plugins, thèmes et langues). Ce site est basé sur PEM. Ce site permet des contributions faciles au cœur de Phyxo sans en modifiant le code. Il est possible d'y déposer des thèmes, des plugins ou de nouvelles langues. Dimanche, 9 novembre, 2014. Un embryon de site. Le blog du projet, ici même. Et j'ai commenc...

blog.phzak.com

Coast to Coast 2015 Adventure , Southern Tier

Coast to Coast 2015 Adventure , Southern Tier. Paul Zak's Strava activities. Saturday, September 26, 2015. I will be leaving the tour tomorrow. Over the past few days, I've decided that this tour isn't the way I want to see the country and so tomorrow I will part with the ride. The schedule is, of necessity fixed and there is limited opportunity to see the things I'd want to see. Clearly I can keep up with the riders but I've been forced to ask myself why I'd want to. Monday I'll be able to rent a car, I...

blog.phzh.ch

blog.phzh.ch – Blogservice der PH Zürich

Blogservice der PH Zürich. Dozierende, Studierende und Mitarbeitende der Pädagogischen Hochschulen Zürich und Schaffhausen, sowie Angehörige der Universität Zürich können hier zu Arbeitszwecken ein Blog einrichten. Externe können nur im Rahmen von Vorlesungen an der PH Zürich ein Blog erstellen. Wenden Sie sich dafür bitte an den Dozenten bzw. die Dozentin. Stolz präsentiert von WordPress.

blog.phzx.net

平湖中学教师博客

校内外访问域名 http:/ blog.phzx.net. 最新发表 More. 教学反思 More. 教育学习 More. 情感绿洲 More. 科学技术 More. 精华日志 More. 教学教案 More. 文学艺术 More. 娱乐休闲 More. 电脑网络 More.

blog.pi-academy.com

Distance Learning School for Private Investigators

Academy of Professional Investigation. Our Level 3 BTEC. People who have little. Enrol now for 652 and save over 190! Making your next move? Become a Private Investigator with the Academy of Professional Investigation. For an exciting and rewarding career. Enrol today and save 192.60! Hurry offer ends soon. We've got you covered. Buy our Private Investigation Licensing Course,. The IQ Level 3 Award for Professional Investigators. And get your enrolment and examination for FREE! This is one of the few bus...