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bo-protscience | webtools and databases for protein science from Bernard Offmann's research groupwebtools and databases for protein science from Bernard Offmann's research group
http://www.bo-protscience.fr/
webtools and databases for protein science from Bernard Offmann's research group
http://www.bo-protscience.fr/
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bo-protscience | webtools and databases for protein science from Bernard Offmann's research group | bo-protscience.fr Reviews
https://bo-protscience.fr
webtools and databases for protein science from Bernard Offmann's research group
bo-protscience.fr
PB-PENTAPEPT | A platform to investigate the structural features of pentapeptides in protein structures
http://www.bo-protscience.fr/pentapept
Darr; Skip to Main Content. A platform to investigate the structural features of pentapeptides in protein structures. Last update on Tuesday, March 8, 2016. PB-PENTAPEPT is a platform which combines PB-PENTAdb. A database of pentapeptides. From protein structures and two predictive tools (see below). It makes use of a 16-state structural alphabet, the protein blocks. And study of their observed structural variability ( PB-SVindex. 8211; A tool to query the database of pentapeptides.
mOBP database
http://www.bo-protscience.fr/mobpdb
A database for the odorant binding proteins from mosquitoes. January 4th, 2016. Mosquito OBP database (mOBPdb). Welcome to the database for odorant binding proteins (OBP) for mosquitoes. Among the mosquito OBPs, we are currently reporting 69 OBPs in. 111 OBPs in the. And 109 OBPs in the. There are 3 families of odorant binding proteins in mosquitoes. And OBPs formerly know as the. The hallmark of OBPs are their conserved 6 cysteines. That forms 3 disulphide bridges. A subgroup in the. Screened against a ...
Bio-H2 simulator
http://www.bo-protscience.fr/h2
Simulation of hydrogen bioproduction. Bio-H2 simulator is a web application which simulates biological production of hydrogen by cell free system. Enzymes are the key agents in metabolic pathways. Cell-free synthetic pathway biotransformation, cell free system for short, contains only the enzymes responsible for a function in vitro without side pathways or cell duplication. Cell free system uses only its enzymes to convert a target substrate into a value product. Cell free system for hydrogen production.
FoRSA – Fold Recognition using a Structural Alphabet
http://www.bo-protscience.fr/forsa
Darr; Skip to Main Content. Fold Recognition using a Structural Alphabet. Fold recognition is an important step in structural annotation of proteins with no homologue of known 3-D structure identified using sequence-search methods. FoRSA provides a unique fold recognition algorithm which is based on calculation of conditional probability for the amino acid sequence of a protein to fit to a particular fold. To cite this application :. Mahajan S, de Brevern AG, Sanejouand YH, Srinivasan N, Offmann B.
PBE – Protein Blocks Expert 2.0
http://www.bo-protscience.fr/pbe
PBE – Protein Blocks Expert 2.0. Protein Structure Analysis and Comparison using Protein Blocks, a Structural Alphabet composed of 16 structural prototypes. AA&PB Extractor 2. March 8th, 2016. PBE server 2.0 aims to provide a platform for protein structure analysis and comparison. Using well defined library of short structural motifs (SSMs) known as structural alphabets (SA). It uses a set of 16 SSMs called Protein Blocks. PBE international development team is composed of :. 8211; A database for analysis...
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bo-protscience | webtools and databases for protein science from Bernard Offmann's research group
Webtools and databases for protein science from Bernard Offmann's research group. Fold recognition using a structural alphabet (FORSA). Pentapeptides in protein structures platform (PENTAPEPT). PENTAdb – database of pentapeptides. PB-kPRED – prediction of protein backbones using a structural alphabet. PB-SVi – structural variability of pentapeptides. PBE-T: Protein Block Transform (converts a PDB structure into Protein Blocks sequence). PB-ALIGN: very fast protein structure comparison and mining.
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