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A database of protein fragments | BriX

A database of protein fragments. BriX is a vast database of protein fragments, clustered on their backbone similarity. BriX. Contains fragments from 7290 proteins from the Astral40. Set, fragmented in lengths ranging from 4 to 14 amino acids and clustered against 6 different distance thresholds on similarity of the protein backbone. Loop BriX. Contains loop fragments from 14.525 proteins from the Astral95. Set, clustered according to end-to-distance and anchor residue superposition.

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A database of protein fragments | BriX | brix.crg.es Reviews

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A database of protein fragments. BriX is a vast database of protein fragments, clustered on their backbone similarity. BriX. Contains fragments from 7290 proteins from the Astral40. Set, fragmented in lengths ranging from 4 to 14 amino acids and clustered against 6 different distance thresholds on similarity of the protein backbone. Loop BriX. Contains loop fragments from 14.525 proteins from the Astral95. Set, clustered according to end-to-distance and anchor residue superposition.

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7 brix applications

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A database of protein fragments | BriX | brix.crg.es Reviews

https://brix.crg.es

A database of protein fragments. BriX is a vast database of protein fragments, clustered on their backbone similarity. BriX. Contains fragments from 7290 proteins from the Astral40. Set, fragmented in lengths ranging from 4 to 14 amino acids and clustered against 6 different distance thresholds on similarity of the protein backbone. Loop BriX. Contains loop fragments from 14.525 proteins from the Astral95. Set, clustered according to end-to-distance and anchor residue superposition.

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Vls3d - Modeling loops

http://www.vls3d.com/links/bioinformatics/3d-structure-prediction/modeling-loops

Doctoral school for therapeutic Innovation. Computational Biology and Chemistry. Protein, DNA, RNA, Glycan modeling. Protein-protein docking, template-based docking. Hotspots, Interace residues, PPI modulators. PPI databases, network. Binding pockets and ligand-pocket datasets. Peptides, antibodies, epitopes. Visualization - commercial tools. Chemistry toolkits and utilities. Manage collections - chemical space. ADMET- physchem predictions - related tools. Off-targets, drug repurposing. Template based lo...

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http://www.crg.eu/en/content/scientific-services-scientific-resources/software

International and Scientific Affairs. Technology and Business Development Office. Severo Ochoa Visiting Scientist Programme. Fellowships at the CRG. CRG in the Media. A database for the prediction of protein-protein interactions of modular domains. Serrano s Group (EMBL-CRG Partnership). Type: Database / Category: Protein Function Analysis]. For more information about this software, please click here. An algorithm for the prediction of the helical content of peptides. Agadir is a prediction algorithm bas...

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A database of protein fragments | BriX

A database of protein fragments. BriX is a vast database of protein fragments, clustered on their backbone similarity. BriX. Contains fragments from 7290 proteins from the Astral40. Set, fragmented in lengths ranging from 4 to 14 amino acids and clustered against 6 different distance thresholds on similarity of the protein backbone. Loop BriX. Contains loop fragments from 14.525 proteins from the Astral95. Set, clustered according to end-to-distance and anchor residue superposition.

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