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debianmed.blogspot.com

Debian in Biology and Medicine

Thoughts on Open Source with Debian in the fields of computational biology and medical informatics.

http://debianmed.blogspot.com/

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Debian in Biology and Medicine | debianmed.blogspot.com Reviews
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Thoughts on Open Source with Debian in the fields of computational biology and medical informatics.
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Debian in Biology and Medicine | debianmed.blogspot.com Reviews

https://debianmed.blogspot.com

Thoughts on Open Source with Debian in the fields of computational biology and medical informatics.

INTERNAL PAGES

debianmed.blogspot.com debianmed.blogspot.com
1

Debian in Biology and Medicine: 2011 Codefest, BOSC and ISMB

http://debianmed.blogspot.com/2011/07/2011-codefest-bosc-and-ismb.html

Debian in Biology and Medicine. Thoughts on Open Source with Debian in the fields of computational biology and medical informatics. Friday, 22 July 2011. 2011 Codefest, BOSC and ISMB. Vienna just hosted the Codefest. Of the Open Bioinformatics Foundation, followed by the Bioinformatics Open Source Conference ( BOSC. BOSC then brought a series of additional promising contacts and so did the ISMB itself. There is a strong interest from many sides to get getData. Tools, maintained by Charles, into it, start...

2

Debian in Biology and Medicine: Debian Med Bits: Report from LSM Geneva by Andreas Tille

http://debianmed.blogspot.com/2012/07/debian-med-bits-report-from-lsm-geneva.html

Debian in Biology and Medicine. Thoughts on Open Source with Debian in the fields of computational biology and medical informatics. Sunday, 15 July 2012. Debian Med Bits: Report from LSM Geneva by Andreas Tille. In this report from LSM 2012 in Geneva. I will report about. Medical imaging using Debian. Debian Med packaging workshop. Integration of VistA into Debian. Medical imaging using Debian. Debian Med packaging workshop. We decided to go on for packaging this. After circumeventing some pitfalls i...

3

Debian in Biology and Medicine: November 2014

http://debianmed.blogspot.com/2014_11_01_archive.html

Debian in Biology and Medicine. Thoughts on Open Source with Debian in the fields of computational biology and medical informatics. Thursday, 13 November 2014. Bits from Debian Med team (by Andreas Tille). New set of metapackages. As always you can have a look at the packages in our focus by visiting our tasks pages. Some support for Hospital Information Systems. This release contains, for the first time some support for Hospital Information Systems (HIS) with the dependency fis-gtm of the med-his metapa...

4

Debian in Biology and Medicine: September 2013

http://debianmed.blogspot.com/2013_09_01_archive.html

Debian in Biology and Medicine. Thoughts on Open Source with Debian in the fields of computational biology and medical informatics. Monday, 16 September 2013. DebConf 13 report (by Andreas Tille). I'm beginning my DebConf report in an unofficial "Scenic Hacklab". The short answer is: Yes, it is now my favourite DebConf while I think I do not suffer from the last-Debconf-was-the-best-DebConf-syndrome (and I realised there are others thinking the same. They did a Swiss-like precise work and perfectly succe...

5

Debian in Biology and Medicine: November 2013

http://debianmed.blogspot.com/2013_11_01_archive.html

Debian in Biology and Medicine. Thoughts on Open Source with Debian in the fields of computational biology and medical informatics. Thursday, 28 November 2013. Bits from Debian Med team (by Andreas Tille). Some of these bits are a bit outdated but there is no point in hiding this information just because it is old. Andreas Tille had a talk at FOSDEM. Which is also Video recorded. A quite similar but updated talk was held at DebConf 13. Jabber interview by reporter from India. Article about Debian Med.

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tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: Januar 2011

http://tangiblecomputationalbiology.blogspot.com/2011_01_01_archive.html

Ideas and preliminary work all around free software for Debian and computational biology. Dienstag, 4. Januar 2011. Hin zu BOINC-Server als Debian Paket mit verbesserter Anleitung zur Paketierung mit git. Bereits kennen, diese Infrastruktur zum verteilten Rechnen. Es nutzen diese das Scripps Institut mit Hilfe von IBM im WorldCommunityGrid. Ein Max-Planck-Institut bei Einstein@Home. Und freilich auch SETI@Home. Die Autoren der freien Software. Auf dem Debian Wiki zur Beschreibung des Aufbaus eines BOINC ...

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: April 2012

http://tangiblecomputationalbiology.blogspot.com/2012_04_01_archive.html

Ideas and preliminary work all around free software for Debian and computational biology. Montag, 23. April 2012. BitCoins und FPGA zur technischen Vorbereitung auf die Bioinformatik. Nach vielem Lesen darüber wollte ich es diese Woche nun auch mal probieren: 1KJqLGAEaVMLWNVEq3McPv4KGqSwYLpxEP. Ist nun meine BitCoin Adresse für diesen Blog. Probiert es doch mal aus, ich freue mich über jeden μBitcoin :o) Mein Einstieg war bei BitCoin.de. Aus Dresden bietet bereits einen FPGA-BitMiner. Da sind sich alle M...

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: BitCoins minen ... ein Sprungbrett für FPGA?

http://tangiblecomputationalbiology.blogspot.com/2012/05/bitcoins-minen-ein-sprungbrett-fur-fpga.html

Ideas and preliminary work all around free software for Debian and computational biology. Samstag, 12. Mai 2012. BitCoins minen . ein Sprungbrett für FPGA? Wie praktisch sind nun denn wohl FPGAs? Nimmt man sie sich geschwind zur Hand, wenn man etwas größeres mit FPGA Unterstützung zu rechnen hat? Ich danke den BitCoinern, da sie FPGA plötzlich für die Masse so viel interessanter machen. So wie GPUs die Spiele brauchten, habe ich nichts dagegen, wenn sich FPGAs über BitCoins in die Herzen spielen....CRAN ...

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: Juni 2013

http://tangiblecomputationalbiology.blogspot.com/2013_06_01_archive.html

Ideas and preliminary work all around free software for Debian and computational biology. Mittwoch, 12. Juni 2013. AutoDock and MGLTools: Workshop on Computer Aided Drug Design. Zwei Entwickler der AutoDock suite und der MGLTools, Stefano Forli und Michel Sanner, kommen im September zu uns nach Europa und präsentieren computer aided drug discovery (CADD) im Rahmen eines einwöchigen Workshops. Viel mehr "tangible computational biology" geht nicht. We cordially invite you to the workshop. Pleased forward t...

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: September 2011

http://tangiblecomputationalbiology.blogspot.com/2011_09_01_archive.html

Ideas and preliminary work all around free software for Debian and computational biology. Samstag, 3. September 2011. Debian führt seit einigen Jahren das Paket AutoDock. Zur Verfollständigung des BOINC Server Projektes. Schaute ich nun nochmal vermehrt nach gescheitem Input für AutoDock und wurde fündig bei einer Aktion des WorldCommunityGrid Projektes FightAids@Home, das eben auch mit diesem Werkzeug arbeitet. Dort hat man verständliche Teilmengen der ZINC. Datenbank in vorprozssierter Form abgelegt.

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: November 2011

http://tangiblecomputationalbiology.blogspot.com/2011_11_01_archive.html

Ideas and preliminary work all around free software for Debian and computational biology. Mittwoch, 30. November 2011. Debian Med und Bio-Linux veranstalten einen gemeinsamen "Sprint" fuer ein gemeinsames Lösen von bekannten Problemen und dem Beschreiben von neuen. Unsere Veranstaltungsseite ist http:/ wiki.debian.org/DebianMed/Meeting/Southport2012. Wir sind schon mehr oder minder "voll" wie in "der Frühstücksraum des Hotels fasst nicht mehr Leute". Aber 2-3 können wohl noch kommen. Mein besonderer Dank...

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: Debian+Science+PR

http://tangiblecomputationalbiology.blogspot.com/2012/04/debian-science-und-public-relations.html

Ideas and preliminary work all around free software for Debian and computational biology. Samstag, 21. April 2012. Debian Science und Public Relations . " we suck at PR. Oder rechts an der Seite via Amazon das eine oder andere bitte kaufen), der gibt dies vermutlich eher für die Verbesserung von Debian, nicht für dessen Verbreitung, frei nach: wer Debian finden möchte, der findet Debian. Und wer mitmachen möchte, der kann ja mitmachen ( Debian Diversity Statement. Wie etwa gerade das European Synchrotoron.

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology

http://tangiblecomputationalbiology.blogspot.com/2011/11/debian-med-und-bio-linux-veranstalten.html

Ideas and preliminary work all around free software for Debian and computational biology. Mittwoch, 30. November 2011. Debian Med und Bio-Linux veranstalten einen gemeinsamen "Sprint" fuer ein gemeinsames Lösen von bekannten Problemen und dem Beschreiben von neuen. Unsere Veranstaltungsseite ist http:/ wiki.debian.org/DebianMed/Meeting/Southport2012. Wir sind schon mehr oder minder "voll" wie in "der Frühstücksraum des Hotels fasst nicht mehr Leute". Aber 2-3 können wohl noch kommen. Mein besonderer Dank...

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: Februar 2011

http://tangiblecomputationalbiology.blogspot.com/2011_02_01_archive.html

Ideas and preliminary work all around free software for Debian and computational biology. Freitag, 11. Februar 2011. CRAN, BioConductor, Debian, gibt's nun auch zusammen. Es gibt das diese nicht nur bei Bioinformatikern beliebte Sprache R. Der man ohne es wirklich zu merken plötzlich funktional programmiert. Und statistische Probleme löst. Hierzu gibt es weit über 2000. Pakete (Bibliotheken) im CRAN. Aufgebaut in Analogie zu Perl's CPAN) und excellente bioinformatische Lösungen bei BioConductor. Dh jedes...

tangiblecomputationalbiology.blogspot.com tangiblecomputationalbiology.blogspot.com

Tangible Computational Biology: AutoDock & MGLTools: Workshop on Computer Aided Drug Design

http://tangiblecomputationalbiology.blogspot.com/2013/06/autodock-mgltools-workshop-on-computer.html

Ideas and preliminary work all around free software for Debian and computational biology. Mittwoch, 12. Juni 2013. AutoDock and MGLTools: Workshop on Computer Aided Drug Design. Zwei Entwickler der AutoDock suite und der MGLTools, Stefano Forli und Michel Sanner, kommen im September zu uns nach Europa und präsentieren computer aided drug discovery (CADD) im Rahmen eines einwöchigen Workshops. Viel mehr "tangible computational biology" geht nicht. We cordially invite you to the workshop. Pleased forward t...

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Debian in Biology and Medicine

Debian in Biology and Medicine. Thoughts on Open Source with Debian in the fields of computational biology and medical informatics. Thursday, 13 November 2014. Bits from Debian Med team (by Andreas Tille). New set of metapackages. As always you can have a look at the packages in our focus by visiting our tasks pages. Some support for Hospital Information Systems. This release contains, for the first time some support for Hospital Information Systems (HIS) with the dependency fis-gtm of the med-his metapa...

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