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EVcouplings

Runs your protein of interest. Generates an alignment (if you don‘t have one). Calculates EC scores for all pairs of residues. Maps high ranking ECs onto a contact map. Compares ECs to contacts in 3D structure (if you want). Calculates cumulative EC strength for individual residues. Paints strong ECs onto a 3D structure Read More. Delivers ALL the output as EVCouplings. Folds the protein when unknown structure. Ranks all the models. Allows alternative membrane topology input. Calculates which residues ar...

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EVcouplings | evfold.org Reviews

<META> DESCRIPTION

Runs your protein of interest. Generates an alignment (if you don‘t have one). Calculates EC scores for all pairs of residues. Maps high ranking ECs onto a contact map. Compares ECs to contacts in 3D structure (if you want). Calculates cumulative EC strength for individual residues. Paints strong ECs onto a 3D structure Read More. Delivers ALL the output as EVCouplings. Folds the protein when unknown structure. Ranks all the models. Allows alternative membrane topology input. Calculates which residues ar...

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2 evcouplings

3 evfold

4 publications

5 data sets

6 code

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10 couplings

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EVcouplings | evfold.org Reviews

https://evfold.org

Runs your protein of interest. Generates an alignment (if you don‘t have one). Calculates EC scores for all pairs of residues. Maps high ranking ECs onto a contact map. Compares ECs to contacts in 3D structure (if you want). Calculates cumulative EC strength for individual residues. Paints strong ECs onto a 3D structure Read More. Delivers ALL the output as EVCouplings. Folds the protein when unknown structure. Ranks all the models. Allows alternative membrane topology input. Calculates which residues ar...

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evfold.org

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EVcouplings

http://evfold.org/evfold-web/about.do

Computational Biologist. Head of Debora Marks Lab. At Harvard Medical School. Computational Biologist. Head of the Computational Biology Center (cBio). At Memorial Sloan Kettering Cancer Cancer. Thomas A. Hopf. PhD student at Rostlab. TUM Computer Science) and Debora Marks lab (Harvard Medical School). Software Engineer, Debora Marks lab (Harvard Medical School). Software Engineer, Computational Biology Center (cBio), MSKCC. Postdoctoral fellow at MSKCC. V116 [ Back to top ].

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EVcouplings

http://evfold.org/evfold-web

Sign In / Register. Runs your protein of interest. Generates an alignment (if you don‘t have one). Calculates EC scores for all pairs of residues. Maps high ranking ECs onto a contact map. Compares ECs to contacts in 3D structure (if you want). Calculates cumulative EC strength for individual residues. Paints strong ECs onto a 3D structure Read More. Delivers ALL the output as EVCouplings. Folds the protein when unknown structure. Ranks all the models. Allows alternative membrane topology input. Calculat...

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Please contact us if you notice any strange outputs. Short for open sequence) was created with the intent of providing an open platform to share sequence based analysis to the public. With predicted contacts in yellow). The work done here is the result of students and computing power of Prof. David Baker's Lab. Though we would also like to thank the developers of HHsuite. And folks that maintain the Pfam. May 11, 2014. We've added support for Jackhmmer. May 01, 2014. We also have a beta webserver. That w...

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evfold.org

EVcouplings

Runs your protein of interest. Generates an alignment (if you don‘t have one). Calculates EC scores for all pairs of residues. Maps high ranking ECs onto a contact map. Compares ECs to contacts in 3D structure (if you want). Calculates cumulative EC strength for individual residues. Paints strong ECs onto a 3D structure Read More. Delivers ALL the output as EVCouplings. Folds the protein when unknown structure. Ranks all the models. Allows alternative membrane topology input. Calculates which residues ar...

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