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HBT - Human Brain Transcriptome : Home | hbatlas.org Reviews
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hbatlas.org
HBT - Human Brain Transcriptome : Gene Search
http://hbatlas.org/pages/hbtd
Searches. Basic search provides dynamic gene expression along entire development and adulthood in the cerebellar cortex (CBC), mediodorsal nucleus of the thalamus (MD), striatum (STR), amygdala (AMY), hippocampus (HIP) and 11 areas of neocortex (NCX). Advanced search provides lists of the top 10-100 genes enriched in one of the brain regions. Enter gene names ( Separated by space. 3) Early fetal (10-13PCW). 4) Early mid-fetal (13-16PCW). 5) Early mid-fetal (16-19PCW). 6) Late mid-fetal (19-24PCW).
HBT - Human Brain Transcriptome : Development
http://hbatlas.org/pages/development
Provides spatiotemporal gene expression profiles of more than 90 neurobiological processes. It encompasses neurodevelopment. Searches. Neurodevelopment and neural cell type trajectories provide the principle component analysis of the expression of grouped genes in cerebellar cortex (CBC), mediodorsal nucleus of the thalamus (MD), striatum (STR), amygdala (AMY), hippocampus (HIP) and neocortex (NCX). Neurotransmition trajectory provides the grouped gene expression in the said six brain regions.
HBT - Human Brain Transcriptome : Publications
http://hbatlas.org/pages/publications
Temporal specification and bilaterality of human neocortical topographic gene expression. Mihovil Pletikos, Andre M. Sousa, Goran Sedmak, Kyle A. Meyer, Ying Zhu, Feng Cheng, Mingfeng Li, Yuka Imamura Kawasawa, Nenad Sestan (2014). Spatio-temporal transcriptome of the human brain. Functional and evolutionary insights into human brain development through global transcriptome analysis.
HBT - Human Brain Transcriptome : Data
http://hbatlas.org/pages/data
Kang HJ, et al, Nature, 2011, 478:483-489, Supplemental Material. Supplemental figures and methods (PDF, 7.3Mb). Supplemental tables (Excel, 3.4Mb). GEO archives of original cell files (Accession: GSE25219). DbGAP archives of genotypes and phenotypes files (Accession: phs000406.v1.p1). Johnson MB, et al, Neuron, 2009, 62:494-509, Supplemental Material. Supplemental figures, methods, and tables (PDF, 9.4Mb). Supplemental tables (Excel, 1.9Mb). Sample XRAY auto-generated paper (PDF). Annotated R code (PDF).
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