Looking for the forest through the trees. Notes on learning R, Python and Linux for bioinformatics and genomic-scale data analyses.
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Lisa Johnson Cohen | Looking for the forest through the trees. Notes on learning R, Python and Linux for bioinformatics and genomic-scale data analyses. | monsterbashseq.wordpress.com Reviews
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Looking for the forest through the trees. Notes on learning R, Python and Linux for bioinformatics and genomic-scale data analyses.
monsterbashseq.wordpress.com
Adventures with ONT MinION at MBL’s Microbial Diversity Course | Lisa Johnson Cohen
https://monsterbashseq.wordpress.com/2016/08/13/adventures-with-ont-minion-at-mbls-microbial-diversity-course
Notes on PhD research learning R, Python and Linux for bioinformatics and genomic-scale data analyses. Computing Workflows for Biologists – Dr. Tracy Teal. MMETSP re-assemblies →. Adventures with ONT MinION at MBL’s Microbial Diversity Course. August 13, 2016. My time here at the Microbial Diversity Course. Has come to an end after visiting for the past 2 weeks with our lab’s. Sp isolated by Rebecca Mickol). In Titus Brown’s DIB lab. Assemblies from existing Illumina data. For MinION users, but a login i...
September | 2016 | Lisa Johnson Cohen
https://monsterbashseq.wordpress.com/2016/09
Notes on PhD research learning R, Python and Linux for bioinformatics and genomic-scale data analyses. Monthly Archives: September 2016. September 13, 2016. Update (9/27/2016): 719 assemblies now available at the links below. All FINISHED! Update (9/22/2016): 715 assemblies now available at the links below. I have *almost* finished re-assembling de novo transcriptomes from the Marine Microbial Eukaryotic Transcriptome Sequencing Project (Keeling … Continue reading →. Follow me on Twitter.
MMETSP re-assemblies | Lisa Johnson Cohen
https://monsterbashseq.wordpress.com/2016/09/13/mmetsp-re-assemblies
Notes on PhD research learning R, Python and Linux for bioinformatics and genomic-scale data analyses. Adventures with ONT MinION at MBL’s Microbial Diversity Course. DIB Lab Retreat to Yosemite, February 2017 →. September 13, 2016. Update (9/27/2016): 719 assemblies now available at the links below. All FINISHED! Update (9/22/2016): 715 assemblies now available at the links below. I have *almost* finished re-assembling. At UC Davis. The lab has developed the Eel pond khmer protocol. Let us know if you h...
August | 2016 | Lisa Johnson Cohen
https://monsterbashseq.wordpress.com/2016/08
Notes on PhD research learning R, Python and Linux for bioinformatics and genomic-scale data analyses. Monthly Archives: August 2016. Adventures with ONT MinION at MBL’s Microbial Diversity Course. August 13, 2016. My time here at the Microbial Diversity Course at MBL has come to an end after visiting for the past 2 weeks with our lab’s MinION to sequence genomes from bacterial isolates that students collected from the Trunk River in Woods Hole, MA. (Photo … Continue reading →. Follow me on Twitter.
Marine Microbes! What to do with all the data? | Lisa Johnson Cohen
https://monsterbashseq.wordpress.com/2016/04/07/marine-microbes-what-to-do-with-all-the-data
Notes on PhD research learning R, Python and Linux for bioinformatics and genomic-scale data analyses. Intro git – Lab meeting. Computing Workflows for Biologists – Dr. Tracy Teal →. What to do with all the data? April 7, 2016. UPDATE: Check out Titus’ blog post, Bashing on monstrous sequencing collections. Since Sept 2015, I’ve been a PhD student in. C Titus Brown’s lab. Working with data from. Moore’s Marine Microbial Eukaryotic Transcriptome Sequencing Project (MMETSP). Keeling et al 2014. 8211; left,.
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Lisa Johnson Cohen | Looking for the forest through the trees. Notes on learning R, Python and Linux for bioinformatics and genomic-scale data analyses.
Looking for the forest through the trees. Notes on learning R, Python and Linux for bioinformatics and genomic-scale data analyses. September 13, 2016. Update (9/27/2016): 719 assemblies now available at the links below. All FINISHED! Update (9/22/2016): 715 assemblies now available at the links below. I have *almost* finished re-assembling. Transcriptomes from the Marine Microbial Eukaryotic Transcriptome Sequencing Project ( Keeling et al. 2014. For assembling RNAseq data. Here are 659 assemblies:.
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