moss-stock-center.org moss-stock-center.org

moss-stock-center.org

The International Moss Stock Center Homepage

Homologous recombination targeted gene knockout targeting plant functional genomics. Analysis reverse genetics Physcomitrella patens moss biotechnology moos proteomics bioinformatics bioinformatik EST pflanzen biotechnologie disruption transposon mutagenesis freiburg ralf reski.

http://www.moss-stock-center.org/

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CONTACTS AT MOSS-STOCK-CENTER.ORG

University of Freiburg

Chair Plant Biotechnology Faculty of Biology

Schae●●●●●tr. 1

Fre●●●urg , DE, 79104

DE

49.7●●●●6968
pb●@biologie.uni-freiburg.de

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University of Freiburg

Daniel Lang

Plant ●●●●●●nology

Fre●●●urg , DE, 79104

DE

49.7●●●●6968
pb●@biologie.uni-freiburg.de

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Homologous recombination targeted gene knockout targeting plant functional genomics. Analysis reverse genetics Physcomitrella patens moss biotechnology moos proteomics bioinformatics bioinformatik EST pflanzen biotechnologie disruption transposon mutagenesis freiburg ralf reski.
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3 biotechnology
4 moos
5 physcomitrella
6 patens
7 homologous recombination
8 functional
9 genomics
10 proteomics
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The International Moss Stock Center Homepage | moss-stock-center.org Reviews

https://moss-stock-center.org

Homologous recombination targeted gene knockout targeting plant functional genomics. Analysis reverse genetics Physcomitrella patens moss biotechnology moos proteomics bioinformatics bioinformatik EST pflanzen biotechnologie disruption transposon mutagenesis freiburg ralf reski.

LINKS TO THIS WEBSITE

cosmoss.org cosmoss.org

PlanTAPDB - Retrieval

http://cosmoss.org/bm/plantapdb

Genome Browser (V1.6). Genome Browser (V3.3). The cosmoss mailing lists. Cosmoss Info / About. Welcome to PlanTAPDB version 1.0. Gene clusters were built by using PSI-BLAST searches and subsequent filtering and clustering steps followed by a comprehensive manual annotation procedure. Phylogenies were created in an automated way for all families using a combination of distance and maximum likelihood methods. The TAP families are listed below, grouped according to their functional category. BSD domain doma...

cosmoss.org cosmoss.org

Documentation

http://www.cosmoss.org/doc.content

Genome Browser (V1.6). Genome Browser (V3.3). The cosmoss mailing lists. Cosmoss Info / About. The nr (non redundant) dataset is based on the ppp dataset (see below). However, each cluster is represented by the longest sequence it contains only. This is similar to the NCBI's unique unigene. Approach. In theory, the nr set represents all genes present in the ppp dataset as well. Nucleic acid database. This dataset is based on the ppp nr. This database is a cleaned up version of the raw EST input data....

cosmoss.org cosmoss.org

FAQ

http://www.cosmoss.org/FAQ.content

Genome Browser (V1.6). Genome Browser (V3.3). The cosmoss mailing lists. Cosmoss Info / About. Q: Some of the buttons and menus don't seem to work properly, why's that? A: Be sure to have javascript enabled in your browser and to use a new browser (e.g. Netscape 7 or Internet Explorer 5 ). Q: I wonder why the default E-value cutoff is 1x10. And not 10.0? Q: How do I interpret the sequence names and the contents of the sequence headers that are in my BLAST output? Q: How do I know which database to choose?

cosmoss.org cosmoss.org

UTR repeats

http://www.cosmoss.org/repeats.content

Genome Browser (V1.6). Genome Browser (V3.3). The cosmoss mailing lists. Cosmoss Info / About. Prediction of UTR repeats using clustered EST data. Stefan A. Rensing*, Daniel Lang and Ralf Reski. University of Freiburg, Plant Biotechnology, Sonnenstr. 5, D-79104 Freiburg, Germany. Stefan.rensing@biologie.uni-freiburg.de, fon 49 761 203-6974, fax -6990. Usage of the predicted repeats enabled us to save computing time while increasing the quality of the clustered data. In: Proceedings of the German Conferen...

cosmoss.org cosmoss.org

cosmoss.org - genonaut

https://www.cosmoss.org/annotation/genonaut

Genome Browser (V1.6). Genome Browser (V3.3). The cosmoss mailing lists. Cosmoss Info / About. Pp1s275 2V6.1 [Genome Browser]. A Martin, D. Lang, J. Heckmann, A.D. Zimmer, M. Vervliet-Scheebaum and R. Reski (2009): A uniquely high number of ftsZ genes in the moss Physcomitrella patens. Plant Biology 11, 744-750. Mol Plant 2009; 2(6) 1359-72. Existing cosmoss reference ID. Existing cosmoss reference ID. Existing cosmoss reference ID. Plant Biology 11, 744-750. Mol Plant 2009; 2(6) 1359-72. Martin A, Lang ...

cosmoss.org cosmoss.org

Cosmoss TreeView

http://www.cosmoss.org/bm/supplementary_trees/Rensing_et_al_2008

Genome Browser (V1.6). Genome Browser (V3.3). The cosmoss mailing lists. Cosmoss Info / About. Supplementary Trees for Rensing et al 2008. ML trees (BKL) with exact parameter estimation, 4 rate categories (PROTMIX) and ProtTest. ABC transporters (sub-families ABDI). ABC transporters (sub-family C). ABC transporters (sub-family F). ABC transporters (sub-family G). Circadian clock/photoperiodism - CDF. Circadian clock/photoperiodism - FT. Circadian clock/photoperiodism - LHY/CCA1.

cosmoss.org cosmoss.org

Physcomitrella genetic map

http://www.cosmoss.org/genmap.content

Genome Browser (V1.6). Genome Browser (V3.3). The cosmoss mailing lists. Cosmoss Info / About. Simple Sequence Repeat (SSR) markers have been detected in the clustered. EST data using MISA. Up to three primer pairs are available per SSR locus. Most of the markers are applicable for PCR analysis of. Accessions and a large part is cross-species applicable in related. The complete set of predicted markers is available here. The search statistics for 24 plant gene indices can be found here.

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