biodiv-bookmarks.blogspot.com
taxonomy bookmarks: Systematics
http://biodiv-bookmarks.blogspot.com/2010/07/systematics.html
This is a growing list of links. I try to keep them organized by function. Please use the date of the post as your indicator of the last time I've checked on a given post/subject. I started this for my own reference (yes, as bookmarks), but decided to "set it free". Well, not that free. I don't like social bookmarking, so here it is. Tuesday, July 13, 2010. Comparative Methods and Phylogenetic Software. EstimateS: Statistical Estimation of Species Richness. Faculty - Diana Leigh Lipscomb.
kepler-project.org
FAQ — Kepler
https://kepler-project.org/users/faq
Only in current section. Example Projects Using Kepler. This page has been designed to answer the questions most commonly asked about Kepler. If you have additional questions that aren't answered here, please post them to the kepler-users. Mailing list with as much detail as possible. What is the Kepler Collaboration? How is Kepler funded? What are the driving applications for Kepler? What is the relationship between Kepler and Ptolemy? Is there a web-based execution system for Kepler? What is a director?
nature.com
Language: The language barrier : Nature News
http://www.nature.com/news/2008/080521/full/453446a.html
Jump to main content. 446-448 (2008) doi:10.1038/453446a. Language: The language barrier. Some researchers think that the evolution of languages can be understood by treating them like genomes - but many linguists don't want to hear about it. Emma Marris reports. Consider a word as it tumbles through history: khun,. Was one of many words transcribed phonetically for the English Nepali dictionary he compiled in the midst of the fighting. And then, in the 1960s, the word khun. In these models, the word is ...
biodiv-bookmarks.blogspot.com
taxonomy bookmarks: Biodiversity Informatics
http://biodiv-bookmarks.blogspot.com/2010/07/biodiversity-informatics.html
This is a growing list of links. I try to keep them organized by function. Please use the date of the post as your indicator of the last time I've checked on a given post/subject. I started this for my own reference (yes, as bookmarks), but decided to "set it free". Well, not that free. I don't like social bookmarking, so here it is. Tuesday, July 13, 2010. BioCISE - Resource Identification for a Biological Collection Information Service in Europe. Catalogue of Life : 2006 Annual Checklist : Browse taxa.
blackrim.org
Funding – Lab of Stephen A. Smith
http://blackrim.org/funding
Lab of Stephen A. Smith. Total funding awarded to date: $2,754,915. NSF ABI (2015-2018, #1458466, $294,514) — Co PI — Connecting resources to enable large-scale biodiversity analyses. NSF DEB (2014-2017, #1354048, $590,000) — PI — From Cacti to Carnivores, Transcriptomics of Caryophyllales. NSF FESD (2015-2018, #1338694 $672,000) — Co PI — The Dynamics of Mountains, Landscapes and Climate in the Distribution and Generation of Biodiversity of the Amazon/Andean Forest. Before University of Michigan. Open T...
dendropy.org
SumTrees: Phylogenetic Tree Summarization and Annotation — DendroPy 4.2.0 documentation
http://www.dendropy.org/programs/sumtrees.html
DendroPy 4.2.0 documentation. SumTrees: Phylogenetic Tree Summarization and Annotation. Is a program by Jeet Sukumaran. And Mark T. Holder. To summarize non-parameteric bootstrap or Bayesian posterior probability support for splits or clades on phylogenetic trees. The support for the splits will be mapped onto one or more target trees either in terms of node labels or branch lengths. The target trees can be supplied by yourself, or, if no target trees are given, then a a. 8221; flag is used, or edge leng...
genomevolution.org
FAQs - CoGepedia
https://genomevolution.org/wiki/index.php/FAQs
Commonly asked questions about CoGe. Why call it CoGe? Why make another comparative genomics system? How is CoGe designed and put together? What is needed to run CoGe? What is CoGe's sequence analysis workflow or pipeline? What web browser do you recommend and how should it be configured? What programming languages/software are used in CoGe? Can I add a genome? What is CoGe's data release policy? What is CoGe's Graphical Genomic Visualization Library? Can CoGe be installed locally. How can I link to CoGe?
currents.plos.org
The Tree of Life and a New Classification of Bony Fishes – PLOS Currents Tree of Life
http://currents.plos.org/treeoflife/article/the-tree-of-life-and-a-new-classification-of-bony-fishes
Aims & Scope. The Tree of Life and a New Classification of Bony Fishes. April 18, 2013. Print or Save PDF. This article is either a revised version or has previous revisions. Edition 1 - April 18, 2013. Department of Biological Sciences, The George Washington University, Washington, DC, USA. Oklahoma Biological Survey and Department of Biology, University of Oklahoma, Norman, OK, USA. Fishes, University of Alaska Fairbanks, Fairbanks, Alaska, United States of America, University of Alaska Museum. Departm...
genomeprojectsolutions.com
News and Publications
http://www.genomeprojectsolutions.com/News_and_publications.html
Sequencing and informatics with both academic and corporate partners. To see a sample of publications by our scientists. Genome Project Solutions and collaborators at the Colorado School of Mines. And Virginia Bioinformatics Institute. Publish a description of the complete genome of the stramenopile alga, Nannochloropsis gaditana. Scientists from Genome Project Solutions, with collaborators from Rutgers University and elsewhere, publish a description of the genome of the glaucophyte, Cyanophora paradoxa.
