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Probabilities on Genetic Graphs: Home

POGG software allows to determine the transition probabilities of a weighted Markov chain based on some quantitative properties of asymptotic additive or multiplicative costs. It has been proven to be very meaningful for studying biological networks. It permits to compute some classical values such as:. The number of times a state or a path are accessed during a given period of time. The probability to access a state or a path at least once.

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POGG software allows to determine the transition probabilities of a weighted Markov chain based on some quantitative properties of asymptotic additive or multiplicative costs. It has been proven to be very meaningful for studying biological networks. It permits to compute some classical values such as:. The number of times a state or a path are accessed during a given period of time. The probability to access a state or a path at least once.

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Probabilities on Genetic Graphs: Home | pogg.genouest.org Reviews

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POGG software allows to determine the transition probabilities of a weighted Markov chain based on some quantitative properties of asymptotic additive or multiplicative costs. It has been proven to be very meaningful for studying biological networks. It permits to compute some classical values such as:. The number of times a state or a path are accessed during a given period of time. The probability to access a state or a path at least once.

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Probabilities on Genetic Graphs: Description

http://pogg.genouest.org/wiki.php/Description

POGG software allows to determine the transition probabilities of a weighted Markov chain based on some quantitative properties of asymptotic additive or multiplicative costs. It has been proven to be very meaningful for studying biological networks. It permits to compute some classical values such as:. The number of times a state or a path are accessed during a given period of time. The probability to access a state or a path at least once. Get the Matlab version of POGG with several examples here.

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Probabilities on Genetic Graphs: Videos

http://pogg.genouest.org/wiki.php/Videos

Scientific presentations of POGG framework. Mov file, 200MB). Mp4 file, 20MB).

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Probabilities on Genetic Graphs: Documentation

http://pogg.genouest.org/wiki.php/Documentation

For a submitted article. It shows a description of MatlabPOGG functionalities on a simple two genes example and on eColi carbon starvation model. Only in french, sorry).

4

Probabilities on Genetic Graphs: Download

http://pogg.genouest.org/wiki.php/Download

Python version (dedicated forge here : pypogg. Matlab package (an zip archive containing both the source code and examples MatlabPOGG.zip. Find it also on the Biotempo Mobyle server http:/ mobyle.biotempo.univ-nantes.fr. Linux and Mac OS X. Download the latest stable version 2.2 for Linux and Mac OS X ( Pogg2 2 tar.gz. Download the latest stable version 2.2 for Linux and Mac OS X ( Poggwin2 2 tar.gz. Sbml : www.sbml.org. Qhull : www.qhull.org. Graphviz : www.graphviz.org.

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Probabilities on Genetic Graphs: Home

POGG software allows to determine the transition probabilities of a weighted Markov chain based on some quantitative properties of asymptotic additive or multiplicative costs. It has been proven to be very meaningful for studying biological networks. It permits to compute some classical values such as:. The number of times a state or a path are accessed during a given period of time. The probability to access a state or a path at least once.

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