kbase.us
Data Policy & Sources | KBase
http://www.kbase.us/data-policy-and-sources
Data & Tools. Data Policy & Sources. Narrative Interface Quick Start. Narrative Interface User Guide. Narrative Interface Video Tutorial. Data Upload and Download Guide. Apps & Methods. Data Policy & Sources. KBase conforms to the Information and Data Sharing Policy. Data publicly available in KBase. Comes from the sources listed on this page. Additionally, users can upload their own data to KBase to analyze it, and can choose how widely their data should be shared. Page for more information. Creative Co...
bpetersen.dk
Travel Archives - Bent Petersen
http://www.bpetersen.dk/blog/category/travel
My personal and professional adventure into Science. CV for Bent Petersen. My personal and professional adventure into Science. You are here: Home. 5 good reasons to take your MSc degree in China. February 12, 2016. For the last two years I have been member of a teaching team that went to Beijing, China to teach danish and Chinese students. From my side they were taught in Introduction to Bioinformatics and Next Generation Sequencing. 5 good reasons to take your MSc degree in China. Although prices in Ch...
nmpdr.org
Vibrio < Main < NMPDR
http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Vibrio
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;. I Taxonomy ID: 666. Is a Gram negative, motile, curved rod. Its main portal of entry is via oral ingestion of contaminated food or water. More than 138 serogroups are known. Serogroup O1 is responsible for pandemic cholera and is divided into two biotypes, Classical and El Tor. The El Tor biotype is responsible for the current cholera pandemic. Your contribution will be credited with a byline. B Lifecycle and Morphology.
phantome.org
Seed Viewer - Home
http://www.phantome.org/PhageSeed/seedviewer.cgi
SEED Viewer version 2.0. Welcome to the SEED Viewer - a read-only browser of the curated SEED data. For more information about The SEED please visit theSEED.org. Visit the Daily SEED. What is the SEED. HowTo use the SEED Viewer. Submitting Data to SEED. I forgot my Password. We currently have 105 Archaea, 2147 Bacteria, 561 Eukaryota, 46 Plasmids and 4020 Viruses in our database. To get started, either select an. A subsystem from the. Tab, enter an id in the. Tab, or type a search word into the.
nmpdr.org
EssentialGenes < Main < NMPDR
http://www.nmpdr.org/FIG/wiki/view.cgi/Main/EssentialGenes
EGGS: Essential Genes on Genomic Scale. EGGS: Essential Genes on Genomic Scale. NMPDR curators have collated genome-scale essentiality datasets from published studies involving 10 bacterial species, including the priority pathogens. Staphylococcus aureus, Streptococcus pneumoniae, Mycobacterium tuberculosis, Salmonella enterica. Experiment. While there are 16 studies cited, there is one strain (genome) annotated for each of 10 different organisms studied. Comparative analysis of these data across multipl...
nmpdr.org
ComparativeTools < Main < NMPDR
http://www.nmpdr.org/FIG/wiki/view.cgi/Main/ComparativeTools
The NMPDR offers a set of genome caparison tools for analyzing the genomic data in our database. The Annotation Clearinghouse contains annotations from all the major databases as well as assertions submitted by experts. Selecting a genome in this tool will show you all the clearinghouse annotations for that genome. The motivation for the Signature Genes Tool is to try to locate genes related to a phenotype that is associated with one set of organisms (call this set1) but not with another (call these set2).
nmpdr.org
OrganismDataSummaries < Main < NMPDR
http://www.nmpdr.org/FIG/wiki/view.cgi/Main/OrganismDataSummaries
NMPDR Core Pathogens and Supporting Genomes. Bacterial pathogen and toxin threats to biodefense. All essentially complete, public genomes are available in NMPDR to support extensive comparative analysis. NMPDR core genomes are listed first, followed by 44 Archaea. Campylobacter jejuni RM1221 (195099.3). Campylobacter jejuni subsp. doylei 269.97 (360109.7). Campylobacter jejuni subsp. jejuni 260.94 (360108.3, 10 contigs). Campylobacter jejuni subsp. jejuni 81-176 (354242.8, 3 contigs). Chlamydophila cavia...
nmpdr.org
Ureaplasma < Main < NMPDR
http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Ureaplasma
Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae;. I Taxonomy ID: 2129. Formerly consisted of 2 biovars. Biovar 1, which includes serovars 1, 3, 6, and 14 has been designated. While biovar 2 (serovars 1, 4, 5, and 7-13) has been designated. Urethritis - Google News. Urethritis (inflammation of the urethra) causes, signs, and treatments - Bel Marra Health. Urethritis (inflammation of the urethra) causes, signs, and treatments. Stifel Has 3 Top Stocks to Buy With 95% or More Upside Potential.
nmpdr.org
Staphylococcus < Main < NMPDR
http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Staphylococcus
Taxonomy: Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;. I Taxonomy ID: 1280. Is a Gram-positive pathogen that causes a wide range of diseases, and is becoming increasingly resistant to antibiotics (1). These resistant bacteria are called methicillin-resistant. Is responsible for a variety of ailments, including carbuncles, food poisoning, wound and medical device-related infections, bacteremia, necrotizing pneumonia, and endocarditis (2). Produce the enzyme coagulase. Parent: Staphylococ...
nmpdr.org
Publications < Main < NMPDR
http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Publications
The RAST Server: Rapid annotations using subsystems technology. The National Microbial Pathogen Database Resource (NMPDR): A genomics platform based on subsystem annotation. National Institute of Allergy and Infectious Diseases bioinformatics resource centers: New assets for pathogen informatics. Greene JM, Collins F, Lefkowitz EJ, Roos D, Scheuermann RH, Sobral B, Stevens R, White O, Di Francesco V. Infect Immun. 2007 Jul;75(7):3212-9. [Epub 2007 Apr 9]. Sorci L, Martynowski D, Rodionov DA, Eyobo Y, Zog...
