Starting position of sequence:. Enter raw sequence of an entire protein here. Enter transmembrane-helical regions (e.g., 26-44) separated by commas for your protein. How do our predictions match up on real structures? From our paper (red = correctly predicted kinks, blue = incorrectly predicted kinks, green = kinks not predicted). Legend found in original paper under supplementary figure S2.
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TM Kink Predictor | tmkinkpredictor.mbi.ucla.edu Reviews
https://tmkinkpredictor.mbi.ucla.edu
Starting position of sequence:. Enter raw sequence of an entire protein here. Enter transmembrane-helical regions (e.g., 26-44) separated by commas for your protein. How do our predictions match up on real structures? From our paper (red = correctly predicted kinks, blue = incorrectly predicted kinks, green = kinks not predicted). Legend found in original paper under supplementary figure S2.
tmkinkpredictor.mbi.ucla.edu
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Online Analysis Tools - Protein Secondary Structure
http://www.molbiol-tools.ca/Protein_secondary_structure.htm
Secondary structure prediction - is a HNN (Hidden Neural Network) secondary structure prediction program that uses the PSI-BLAST algorithm to produce a PSSM for the input sequence, which it then uses to perform its prediction. ( Reference:. K Lin et al. 2005. Bioinformatics 21:. Technical University of Berlin, Germany). 1D Protein Structure Prediction Server. For a metasite linked to a wide range of protein sequence analysis and structure predictions online programs, I recommend PredictProtein. Predictio...
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Biochemistry Instrumentation Core Technology Center. Bioinformatics and Computational Core Technology Center. Macromolecular Crystallization Core Technology Center. Nuclear Magnetic Resonance (NMR) Core Technology Center. X-ray Crystallography Core Technology Center. Faculty / Principal Investigators. Seminars & Meetings. Perform Ellipsoidal Truncation and Anisotropic Scaling. SAVEs v4: Structure Analysis and Verification server. Self Rotation Function Server. Transmembrane Kink Predictor (TMKink). Ident...
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TM Kink Predictor
Starting position of sequence:. Enter raw sequence of an entire protein here. Enter transmembrane-helical regions (e.g., 26-44) separated by commas for your protein. How do our predictions match up on real structures? From our paper (red = correctly predicted kinks, blue = incorrectly predicted kinks, green = kinks not predicted). Legend found in original paper under supplementary figure S2.
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