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Archive for the Galaxy-User mailing list: questions about the public Galaxy instance at UseGalaxy.org.

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more options,galaxy user,galaxy,computational biomedical research,accessibility,reproducibility,transparency,advanced search,new topic,people,replies,last post,views,by dave clements 3,cummerbund on galaxy,by jim johnson 2,by jen hillman jackson,by peppe
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Galaxy Users | Mailing List Archive | user.list.galaxyproject.org Reviews

https://user.list.galaxyproject.org

Archive for the Galaxy-User mailing list: questions about the public Galaxy instance at UseGalaxy.org.

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Galaxy Users List Archive - (no subject)

http://user.list.galaxyproject.org/no-subject-tp4656761.html

Galaxy Users List Archive. Only in this topic. Open this post in threaded view. Report Content as Inappropriate. I uploaded some file that resulted to be too big and my history showed that that was not more space available. Now I deleted few file, and I should have 80 GB available, but my history shows still that I have no more space available for analysis. Can anyone from the Galaxy team check this for me? The Galaxy User List is being replaced by the Galaxy Biostar. Please use the interface at:. 2 Doub...

2

Galaxy Users List Archive - Re: galaxy-user Digest, Vol 95, Issue 9

http://user.list.galaxyproject.org/Re-galaxy-user-Digest-Vol-95-Issue-9-tp4656754p4656757.html

Galaxy Users List Archive. Only in this topic. Re: galaxy-user Digest, Vol 95, Issue 9. Open this post in threaded view. Report Content as Inappropriate. Re: galaxy-user Digest, Vol 95, Issue 9. Actually, if the ones I ordered last year are expiring soon, I'd suggest people continue to use those before recently ordered kits. Original Message - - -. Send galaxy-user mailing list submissions to. To subscribe or unsubscribe via the World Wide Web, visit. You can reach the person managing the list at. To: Da...

3

Galaxy Users List Archive - Help with Summary Statistics

http://user.list.galaxyproject.org/Help-with-Summary-Statistics-tp4654346p4656748.html

Galaxy Users List Archive. Only in this topic. Help with Summary Statistics. Open this post in threaded view. Report Content as Inappropriate. Help with Summary Statistics. I am attempting to use Galaxy to calculate the mean sequence read length and identify the range of read lengths for my 454 data. The data has already been organized and sorted by species. The format of the data is as follows:. The Galaxy User list should be used for the discussion of. Use the Galaxy Development list:. I have attempted...

4

Galaxy Users List Archive - CummeRbund on Galaxy

http://user.list.galaxyproject.org/CummeRbund-on-Galaxy-tp4656763p4656765.html

Galaxy Users List Archive. Only in this topic. Ganote, Carrie L. Open this post in threaded view. Report Content as Inappropriate. Is the cummeRbund wrapper on Galaxy yet functional? I've got some replicates that I'm trying to test for a user on our local Galaxy, but I just can't get the program to behave. Using cuffdiff v2.2.0 604fa75232a2. CummeRbund version 0.0.7, 137aab1d9ac1. R 2152 and 3.0.1 (tried both). Last galaxy-dist/stable changeset: 7a7985a007fb. I ran cuffdiff like so:. Unable to find an in...

5

Galaxy Users List Archive - slow running

http://user.list.galaxyproject.org/slow-running-tp4656755.html

Galaxy Users List Archive. Only in this topic. Open this post in threaded view. Report Content as Inappropriate. I am currently running a fastqgroomer on some data (about 7Go big). I am. Surprise because I launched the analysis several hours ago and it is. Still running. I am wondering if everything is alright since usually it. Is faster than that, even on bigger dataset. I had the same problem. Yesterday with fastQC that was not finished after 24h also it was. Thank you in advance for your help. Https:/...

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Galaxy Users | Mailing List Archive

Galaxy Users List Archive. Galaxy Users List Archive. This forum is an archive for the mailing list galaxy-user@bx.psu.edu. Messages posted here will be sent to this mailing list. This is the archive for the. Mailing list, which was used from 2006 through April 2014 for Galaxy user support. In April 2014, Galaxy user support switched from the mailing list archived here to the Galaxy Biostar online forum. At that time this entire archive was also copied to the Galaxy Biostar site. By Ganote, Carrie L.

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