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Vesselin Kolev's Tech Corner

Vesselin Kolev's Tech Corner. Tuesday, 23 August 2016. Compiling and installing GROMACS 2016 by using Intel C/C and Fortran compiler, and adding CUDA support. 2 Setting the building environment. 3 Short notes on AVX-capable CPUs support available in GROMACS. 4 Downloading and installing CUDA. 5 Compiling and installing OpenMPI. 6 Compiling and installing GROMACS. And Scientific Linux 7. By means of using Intel C/C and Fortran compiler. Always use the latest CUDA. During the compilation of GROMACS always ...

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Vesselin Kolev's Tech Corner. Tuesday, 23 August 2016. Compiling and installing GROMACS 2016 by using Intel C/C and Fortran compiler, and adding CUDA support. 2 Setting the building environment. 3 Short notes on AVX-capable CPUs support available in GROMACS. 4 Downloading and installing CUDA. 5 Compiling and installing OpenMPI. 6 Compiling and installing GROMACS. And Scientific Linux 7. By means of using Intel C/C and Fortran compiler. Always use the latest CUDA. During the compilation of GROMACS always ...

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1 content

2 1 introduction

3 7 invoking gromacs

4 gromacs

5 on centos 7

6 with cuda support

7 compiling openmpi

8 see paragraphs 2

9 there

10 cat /proc/cpuinfo

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content,1 introduction,7 invoking gromacs,gromacs,on centos 7,with cuda support,compiling openmpi,see paragraphs 2,there,cat /proc/cpuinfo,processor 23,stepping 2,siblings 24,fpu yes,wp yes,power management,yum localinstall,yum install cuda,intel env

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Vesselin Kolev's Tech Corner | vessokolev.blogspot.com Reviews

https://vessokolev.blogspot.com

Vesselin Kolev's Tech Corner. Tuesday, 23 August 2016. Compiling and installing GROMACS 2016 by using Intel C/C and Fortran compiler, and adding CUDA support. 2 Setting the building environment. 3 Short notes on AVX-capable CPUs support available in GROMACS. 4 Downloading and installing CUDA. 5 Compiling and installing OpenMPI. 6 Compiling and installing GROMACS. And Scientific Linux 7. By means of using Intel C/C and Fortran compiler. Always use the latest CUDA. During the compilation of GROMACS always ...

INTERNAL PAGES

vessokolev.blogspot.com

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Vesselin Kolev's Tech Corner: August 2016

https://vessokolev.blogspot.com/2016_08_01_archive.html

Vesselin Kolev's Tech Corner. Tuesday, 23 August 2016. Compiling and installing GROMACS 2016 by using Intel C/C and Fortran compiler, and adding CUDA support. 2 Setting the building environment. 3 Short notes on AVX-capable CPUs support available in GROMACS. 4 Downloading and installing CUDA. 5 Compiling and installing OpenMPI. 6 Compiling and installing GROMACS. And Scientific Linux 7. By means of using Intel C/C and Fortran compiler. Always use the latest CUDA. During the compilation of GROMACS always ...

2

Vesselin Kolev's Tech Corner

https://vessokolev.blogspot.com/2016/08/compiling-and-installing-gromacs-2016.html

Vesselin Kolev's Tech Corner. Tuesday, 23 August 2016. Compiling and installing GROMACS 2016 by using Intel C/C and Fortran compiler, and adding CUDA support. 2 Setting the building environment. 3 Short notes on AVX-capable CPUs support available in GROMACS. 4 Downloading and installing CUDA. 5 Compiling and installing OpenMPI. 6 Compiling and installing GROMACS. And Scientific Linux 7. By means of using Intel C/C and Fortran compiler. Always use the latest CUDA. During the compilation of GROMACS always ...

3

Vesselin Kolev's Tech Corner: March 2015

https://vessokolev.blogspot.com/2015_03_01_archive.html

Vesselin Kolev's Tech Corner. Sunday, 8 March 2015. How to install CentOS 7 on HP ProLiant BL460c G1/G5. HP ProLiant BL460c G1/G5. Is a very stable and reliable server platform widely employed by the dedicated servers providers. It has built-in HP Smart Array Controller that can be used under Linux by means of HP Smart Array CCISS driver. It provides the kernel modules cciss.ko. Unfortunately Red Hat Inc. Discontinued the support for HP Smart Array CCISS driver. 2 Building the driver disk. The following ...

4

Vesselin Kolev's Tech Corner

https://vessokolev.blogspot.com/2016/08/reducing-memory-usage-by-flattening_10.html

Vesselin Kolev's Tech Corner. Wednesday, 10 August 2016. Reducing the memory usage by flattening the stored symmetric matrices. 2 Flattening a symmetric matrix in case all its diagonal elements are zero. 3 Flattening a symmetric matrix with non-zero diagonal. 4 Effectiveness of the flattening. The square matrix R:. With respect to the values of their diagonal elements the following two types of symmetric matrices are used in the scientific practice:. Different types of atoms):. By using the schema:.

5

Vesselin Kolev's Tech Corner: April 2015

https://vessokolev.blogspot.com/2015_04_01_archive.html

Vesselin Kolev's Tech Corner. Saturday, 18 April 2015. Multicast IPsec protected OSPFv2/OSPFv3 areas. OSPF is still the most used protocol for intra-AS routing. Usually the routers connected to the corporate backbone networks are configured as OSPF speakers (they speak either OSPFv2. Or both). The OSPFv2 protocol provides both simple and cryptographic authentication, and the cryprographic ones is based on the MD5 hash function. In contrast the authetication in OSPFv3 is moved out of the protocol. Two key...

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vessokolev.blogspot.com

Vesselin Kolev's Tech Corner

Vesselin Kolev's Tech Corner. Tuesday, 23 August 2016. Compiling and installing GROMACS 2016 by using Intel C/C and Fortran compiler, and adding CUDA support. 2 Setting the building environment. 3 Short notes on AVX-capable CPUs support available in GROMACS. 4 Downloading and installing CUDA. 5 Compiling and installing OpenMPI. 6 Compiling and installing GROMACS. And Scientific Linux 7. By means of using Intel C/C and Fortran compiler. Always use the latest CUDA. During the compilation of GROMACS always ...

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