vidjil.org
VidjilOpen-source platform for the analysis of high-throughput sequencing data from lymphocytes
http://www.vidjil.org/
Open-source platform for the analysis of high-throughput sequencing data from lymphocytes
http://www.vidjil.org/
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FR
View this contact
Mathieu G-H
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Rouba●●●●●dex 1 , 59053
FR
View this contact
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Vidjil | vidjil.org Reviews
https://vidjil.org
Open-source platform for the analysis of high-throughput sequencing data from lymphocytes
Bonsai :: Bioinformatics Software Server
http://bioinfo.lifl.fr/vidjil
High-Throughput Analysis of V(D)J Immune Repertoire. Is an open-source platform for the analysis of high-throughput sequencing data from lymphocytes. In lymphocytes are essential for immunological diversity. They are also useful markers of pathologies, and in leukemia, are used to quantify the minimal residual disease during patient follow-up. High-throughput sequencing (NGS/HTS) now enables the deep sequencing of a lymphoid population with dedicated Rep-Seq methods. Linked to a patient database. Vidjil-...
start [Bonsai]
http://www.lifl.fr/bonsai
Some of our projects. We are a bioinformatics research group affiliated with INRIA Lille - Nord Europe. And the Centre de Recherche en Informatique, Signal et Automatique de Lille. CRIStAL, Université Lille 1. See our software server. Our Inria activity report. And the list of publications. 2 PhD grants are available. On the subject on algorithms for high-throughput sequencing data (deadline: April 15). October 28-30: Bioinformatics tools for NRPS discovery, From genomic data to the products. Classificat...
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Vidjil
Of V(D)J Immune Repertoire. On vidjil.org or self-hosted. Tag, annotate and merge clones. Send to IMGT/V-QUEST and to IgBlast. Vidjil is an open-source platform for the analysis of high-throughput sequencing data from lymphocytes. Developed by the Bonsai bioinformatics team and its collaborators. Try the web server ». Download the source code ». The analysis is based on a reliable seed-based algorithm. It is extremely fast because, in the first phase, no alignment is performed with database germline sequ...
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