smart.embl.de

SMART: Main page

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). Select your default SMART mode. You can use SMART in two different modes: normal. The main difference is in the underlying protein database used. In Normal SMART. The database contains Swiss-Prot, SP-TrEMBL and stable Ensembl proteomes. In Genomic SMART. Only the proteomes of completely sequenced genomes are used; Ensembl for metazoans and Swiss-Prot for the rest. The complete list of genomes in Genomic SMART is available here.

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SMART: Main page | smart.embl.de Reviews

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Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). Select your default SMART mode. You can use SMART in two different modes: normal. The main difference is in the underlying protein database used. In Normal SMART. The database contains Swiss-Prot, SP-TrEMBL and stable Ensembl proteomes. In Genomic SMART. Only the proteomes of completely sequenced genomes are used; Ensembl for metazoans and Swiss-Prot for the rest. The complete list of genomes in Genomic SMART is available here.

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SMART: Main page | smart.embl.de Reviews

https://smart.embl.de

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). Select your default SMART mode. You can use SMART in two different modes: normal. The main difference is in the underlying protein database used. In Normal SMART. The database contains Swiss-Prot, SP-TrEMBL and stable Ensembl proteomes. In Genomic SMART. Only the proteomes of completely sequenced genomes are used; Ensembl for metazoans and Swiss-Prot for the rest. The complete list of genomes in Genomic SMART is available here.

INTERNAL PAGES

smart.embl.de

1

SMART: What's new?

http://smart.embl.de/help/latest.shtml

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). Changes from version 6.0 to 7.0. Full text search engine. Use the box in the top right corner of any page to perform a full text search of SMART and Pfam domain annotations, p lus the complete protein descriptions for Uniprot and Ensembl proteins. Explore and compare domain architectures in various publicly available metagenomics datasets. ITOL export and visualization. New option can be found in the protein list function select list.

2

SMART: Main page

http://smart.embl.de/index2.cgi

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). You may use either a Uniprot. Sequence identifier (ID) / accession number (ACC) or the protein sequence itself to perform the SMART analysis service. Sequence ID or ACC. Examples: Q4SNE7 Q4SNE7 TETNG nMLRLSLLLLLHCHWASSTLLGWVESPGYPHGYLPHASLNWSRCARKGHIISIRLVHLDLEKSRNCENDAVKVLSDGSPISILCGKKSFAELQSSVNPLLRSSTGGCLTLLFASDYSNTRRHSGFRGFYTEQDFDECRDDPEASCNQFCHNFVGGYYCSCRHGYHLKEDQRTCTVRCSEDLSGLREGALSSPSWPAPYPAHAHCLYTLSVDEHLQVELHFSDGFDVEQSTDGHCVD...

3

SMART: About SMART

http://smart.embl.de/help/smart_glossary.shtml

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). Representation of a prediction of the amino acids in tertiary structures of homologues that overlay in three dimensions. Alignments held by SMART are mostly based on published observations (see domain annotations for details), but are updated and edited manually. Ungapped alignments that usually represent a single secondary structure. Basic local alignment search tool. SMART uses NCBI-BLAST for detection of outlier homologues. The p...

4

SMART: Feedback

http://smart.embl.de/help/feedback.shtml

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). In creating SMART, we have tried to make it user-friendly, information-rich and relatively error-free. However, we encourage everyone who:. Has trouble in understanding the SMART output pages,. Wishes to add to (or criticise! The annotation of domain families,. Has suggestions of domains presently not included among the SMART set, or. Wishes to donate alignments to SMART,. To contact us via e-mail. Or using the form on this page.

5

SMART: About SMART

http://smart.embl.de/help/smart_about.shtml

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). If you would like to have an in-house SMART installation, with the complete web user interface, please contact biobyte solutions GmbH. Letunic I, Doerks T, Bork P. SMART: recent updates, new developments and status in 2015. Nucleic Acids Res 2014; doi:10.1093/nar/gku949. Letunic I, Doerks T, Bork P. SMART 7: recent updates to the protein domain annotation resource. Nucleic Acids Res 2012; doi:10.1093/nar/gkr931. Was introduced as a ...

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bioinformatictools.blogspot.com

Bioinformatics Tools: In-silico characterization of proteins

http://bioinformatictools.blogspot.com/2011/11/in-silico-characterization-of-proteins.html

Bioinformatics has evolved as a great tool for molecular biologists. There are various tools available for helping in reducing the time required to analyze biological materials be it DNA, RNA, Proteins etc. I wish to list here few of the commonly used tools. Please send me suggestions to improve the content. If you like or dislike something, let me know, your inputs matters. contact me: drsanjivk[at]gmail[dot]com. Saturday, November 5, 2011. In-silico characterization of proteins. Different combinations ...

lindinglab.org

Rune Linding : Research Group

http://www.lindinglab.org/sitemap

Only in current section. An overview of the available content on this site. Keep the pointer still over an item for a few seconds to get its description. Navigating cancer network attractors for tumor-specific therapy. Financial Times Story: Big Data Big Science Big Challenges. Positive Selection of Tyrosine Loss in Metazoan Evolution - Take Two. Network Medicine Strikes a Blow against Breast Cancer. INB2012: Network Medicine - "The Movie". Enzyme paves the way for the spread of cancer cells to bones.

lindinglab.org

Links — Rune Linding : Research Group

http://www.lindinglab.org/links

Only in current section. Links to other laboratories, useful tools and databases, institutional units. Doug Lauffenburger : Research Group. Department of Biological Engineering Massachusetts Institute of Technology (MIT). Laboratory of Norbert Perrimon, Ph.D. Department of Genetics Harvard Medical School Howard Hughes Medical Institute. Institute of Molecular Life Sciences University of Zurich. Lunenfeld-Tanenbaum Research Institute Mount Sinai Hospital. Simple Modular Architecture Research Tool.

mendel.imp.ac.at

DOUTfinder

http://mendel.imp.ac.at/dout

Database searches did not return significant domain similarities. Try DOUTfinder analysis of your protein, which will you help evaluate the subsignificant domain hits! INPUT: Homologous Sequence Set. Enter a set of homologous sequences. Enter a single sequence. DOUT Max. E-value. DOUT Min. Dom. Cov. Homologous Sequence Set input:. Sequences provided as a homologous sequence set will be made non-redundant, masked and afterwards analysed via rps-blast. Subsignificant rps-blast hits will be further eval...

parendogen677s10.weebly.com

Protein structure and domains - Dystrophin and Duchenne Muscular Dystrophy

http://parendogen677s10.weebly.com/protein-structure-and-domains.html

Dystrophin and Duchenne Muscular Dystrophy. Dystrophin In the Press. Protein structure and domains. Secondary Structure of the human dystrophin protein was found on UniProt.org. Below is the exact position of each secondary structure in the protein, and to the right is a visual depiction of the data. The domains below were found using SMART. Http:/ smart.embl.de/smart/show motifs.pl. Domain Functions and Predicted Structures. The Calpin Homology (CH) domain has been experimentally shown to strongly bind ...

itol.embl.de

iTOL: Help

http://itol.embl.de/saved_views.cgi

Type 3 or more letters and click Go. Multi value bar charts. Uses Javascript and HTML5 Canvas element to draw the trees. Any modern, standards-supporting browser should work fine. Display of very large trees (more than 10'000 leaves) or trees with very many datasets will be greatly influenced by the speed of your computer and available memory. In our tests, Webkit based browsers offer the best performance (Chromium/Google Chrome, Opera and Safari). Check our user interface video tutorial. ITOL can displa...

lindinglab.science

Rune Linding : Research Group

http://www.lindinglab.science/sitemap

Only in current section. An overview of the available content on this site. Keep the pointer still over an item for a few seconds to get its description. Navigating cancer network attractors for tumor-specific therapy. Financial Times Story: Big Data Big Science Big Challenges. Positive Selection of Tyrosine Loss in Metazoan Evolution - Take Two. Network Medicine Strikes a Blow against Breast Cancer. INB2012: Network Medicine - "The Movie". Enzyme paves the way for the spread of cancer cells to bones.

letunic.com

Development

http://www.letunic.com/development.html

Bio = (a.z);. Bioinformatics development and consulting. ITOL: interactive Tree Of Life. Interactive Tree Of Life. Is an online tool for the display and manipulation of phylogenetic trees. It provides most of the features available in other tree viewers, and offers a novel circular tree layout, which makes it easy to visualize mid-sized tree (up to several thousand leaves). Trees can be exported to several graphical formats, both bitmap and vector based. Click the thumbnails for full size images. Various...

vanvreedegen564s14.weebly.com

Future Directions - Juvenile Myoclonic Epilepsy the EFHC1 gene

http://vanvreedegen564s14.weebly.com/future-directions.html

This page was created for University of Wisconsin Genetics 564. Chemical Genetics and RNAi. This page was created for University of Wisconsin undergraduate course Genetics 564. What research can be done to investigate EFHC1 and Epilepsy? And it is within these DM10 domains that the disease-causing mutations are occuring. Key evidence for the role of DM10 domains in EFHC1 function comes from studies of Rib72, the homolog of EFHC1 of chlamydomonas, or green algae single cellular organisms (see image 1)&#46...

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En poursuivant votre navigation sur ce site, vous acceptez l'utilisation de cookies pour vous proposer des contenus et services adaptés à vos centres d'intérêts. En savoir plus et gérer ces paramètres. 01 30 49 40 40. ACHAT VOITURE NEUVE SMART PAR VOTRE MANDATAIRE. Acheter une SMART neuve avec remise. SMART NEUVE EN PROMOTION. Pouvant atteindre 36% par rapport au prix du constructeur smart. Vous pouvez ainsi, en toute sécurité, réaliser de réelles économies. Sur l'achat de votre voiture neuve. Le véhicul...

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SMART: Main page

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). Select your default SMART mode. You can use SMART in two different modes: normal. The main difference is in the underlying protein database used. In Normal SMART. The database contains Swiss-Prot, SP-TrEMBL and stable Ensembl proteomes. In Genomic SMART. Only the proteomes of completely sequenced genomes are used; Ensembl for metazoans and Swiss-Prot for the rest. The complete list of genomes in Genomic SMART is available here.

smart.embl.de

SMART: Main page

Schultz et al. (1998). Proc Natl. Acad. Sci. USA. Letunic et al. (2014). Select your default SMART mode. You can use SMART in two different modes: normal. The main difference is in the underlying protein database used. In Normal SMART. The database contains Swiss-Prot, SP-TrEMBL and stable Ensembl proteomes. In Genomic SMART. Only the proteomes of completely sequenced genomes are used; Ensembl for metazoans and Swiss-Prot for the rest. The complete list of genomes in Genomic SMART is available here.

smart.emblheidelberg.de

emblheidelberg.de

Ist diese Domain verfuegbar? Nein, diese Domain ist bei der DENIC registriert und steht demnach nicht mehr zur Verfuegung. Wer ist der Domaininhaber und wie kann ich Ihn erreichen? Sie erreichen uns über folgende Email Adresse:. So erreichen Sie uns:. Für Ihre Homepage benötigen Sie Webspace. Und zum abspielen vieler Videoformate den VLC. Jetzt noch einfacher an Ihr Ziel gelangen, mit einem Internet Routenplaner. Routenplaner kostenlos. Ist eine gute Möglichkeit hierfür.

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Taiwan SMART VITA LIFE INTERNATIONAL CO. LTD Home page | Taiwantrade.com

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Skip to header menu. Skip to action menu. Skip to quick search. Skip to Recently Updated. Confluence is where your team collaborates and shares knowledge create, share and discuss your files, ideas, minutes, specs, mockups, diagrams, and projects. Life and technology. Each space is a unique project underway at FAU College of Engineering. You will find documentation, contacts, research papers about each project by clicking on the link next to each project listed under spaces. Choose your profile picture.