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Thomas Abeel

Thomas Abeel is currently a post doctoral fellow at Broad Institute of MIT and Harvard. His current research interests include ensemble feature selection and high-throughput next-generation sequence analysis and visualization. He is involved in several open source projects including: GenomeView, Java-ML, AJT and PHP-agenda. Past research interests include promoter prediction and gene prediction.

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Thomas Abeel | abeel.be Reviews
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Thomas Abeel is currently a post doctoral fellow at Broad Institute of MIT and Harvard. His current research interests include ensemble feature selection and high-throughput next-generation sequence analysis and visualization. He is involved in several open source projects including: GenomeView, Java-ML, AJT and PHP-agenda. Past research interests include promoter prediction and gene prediction.
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Thomas Abeel | abeel.be Reviews

https://abeel.be

Thomas Abeel is currently a post doctoral fellow at Broad Institute of MIT and Harvard. His current research interests include ensemble feature selection and high-throughput next-generation sequence analysis and visualization. He is involved in several open source projects including: GenomeView, Java-ML, AJT and PHP-agenda. Past research interests include promoter prediction and gene prediction.

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Curriculum Vitae Thomas Abeel

http://www.abeel.be/cv

Thomas@abeel.be - http:/ www.abeel.be. Delft University of Technology. Faculty of Electrical Engineering, Mathematics and Computer Science. Intelligent Systems - Delft Bioinformatics Lab. Mekelweg 4, 2628 CD Delft, The Netherlands. Http:/ bioinformatics.tudelft.nl/. Broad Institute of MIT and Harvard. Genome Sequencing and Analysis Program. Cambridge, MA, 02142, USA. Http:/ www.broadinstitute.org. 40) Desjardins, C., Cohen, K., Munsamy, V., Abeel, T. 201 (6): 544 551. 39) Malinga, L., Abeel, T. Shea, T&#...

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T wiki

http://www.abeel.be/wiki

How do microbes impact our quality of life? How can we positively influence this impact? Detection of mixed infections from NGS data. Is an interactive genome browser and annotation editor that can deal with a multitude of sequencing and (comparative) genomics data sets. Is a collection of machine learning algorithms aimed at software engineers and programmers. It has well documented source code and provides plenty of code samples and tutorials. Other Open Source projects. Abeel Java Toolkit (AJT). Don't...

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People | Delft Bio-Informatics Lab

http://bioinformatics.ewi.tudelft.nl/People

Professor, Head of the Pattern Recognition and Bioinformatics Group. T: 31 15 27 86424. E: MJT.Reinders AT tudelft.nl. Expertise: sequence analysis, machine learning, data visualization. T: 31 15 27 85114. W: http:/ www.abeel.be/. Professor / Head Bioinformatics and Statistics, NKI-AVL. T: 31 20 5127987. E: LFA.Wessels AT tudelft.nl. T: 31 15 27 85114. E: BPF.Lelieveldt AT tudelft.nl. Professor / VP Bioinformatics and Modeling, KeyGene N.V. Expertise: Plant Bioinformatics and Biotechnology. T: 31 15 27 8.

genomeview.org genomeview.org

Quick start guide | GenomeView

http://www.genomeview.org/content/quick-start-guide

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. You may also be interested in places where to find further documentation. Get going with GenomeView with demo data. Start GenomeView with demo data for B. anthracis preloaded. Start GenomeView with demo data for C. elegans preloaded. Start GenomeView with demo data for D. melanogaster preloaded. More information about demo data set, i.e. what types of data are included etc. Step 3: Waiting for...

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The ISMB 2011 Killer App Awardwas won by Asad Rahman et al. for ECBlast.pdf

http://killerapp.iscb.org/2011.html

The ISMB 2011 Killer App Award. Was won by Asad Rahman et al. for ECBlast.pdf. Front row, left to right):. Janusz M. Bujnicki. Presented PyRy3D: a tool for modeling of large macromolecular complexes. Co-authors: Joanna M. Kasprzak, Wojciech Potrzebowski, and Mateusz Dobrychłop. Presented GWAS Central: a database for the integration and comparative interrogation of genome-wide association study datasets. Award winner) presented ECBlast: a novel tool for searching similar enzymes based on chemical knowledge.

genomeview.org genomeview.org

Tutorials | GenomeView

http://www.genomeview.org/content/tutorials

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. We currently offer a limited set of tutorials on various topics. If you have a nice idea or you wish to contribute a tutorial, let us know. Tutorial: Getting started with NGS data. Tutorial: Loading a MAF file from UCSC. Tutorial: Getting started with NGS data. Bioinformatics and Evolutionary Genomics group at VIB. Source forge project page. ISMB Killer App Award 2010.

genomeview.org genomeview.org

Why are my bam/tdf files not showing? | GenomeView

http://www.genomeview.org/content/why-are-my-bamtdf-files-not-showing

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. Why are my bam/tdf files not showing? Wed, 05/15/2013 - 17:34 Thomas Abeel. I used to be able to see BAM files and now they don't work anymore. Oracle made a change in Java7u21 that broke support for BAM files in one of our dependencies. Upgrading to a recent version ( =2144) of GenomeView resolves this issue. Bioinformatics and Evolutionary Genomics group at VIB. Source forge project page.

genomeview.org genomeview.org

Advanced manual | GenomeView

http://www.genomeview.org/content/advanced-manual

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. This manual covers more advanced topics, which are not of immediate interest to regular users, but more to developers and integration users. Integrating GenomeView as an editor. Bioinformatics and Evolutionary Genomics group at VIB. Source forge project page. Most creative visualization award @ Illumina iDEA challenge 2011. ISMB Killer App Award 2010.

genomeview.org genomeview.org

Support - Frequently asked questions | GenomeView

http://www.genomeview.org/support

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. Support - Frequently asked questions. This section of the documentation tries to address a number of common and less common issues you can come across while working with GenomeView. If your problem is not addressed here, please:. Send an e-mail to the team. In order to help you as quickly as possible, make sure to include the following information:. Which version of GV are you running? You wan...

genomeview.org genomeview.org

Supported versions | GenomeView

http://www.genomeview.org/content/supported-versions

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. Support offered on a best effort basis. Support offered on a low priority best effort basis. The developers of GenomeView offer a limited best-effort support for recent versions free of charge. Unfortunately, as this is a free product, we cannot guarantee anything. If you need a guaranteed service level agreement, contact the project manager. And we will work out a solution.

genomeview.org genomeview.org

Missing BAI file? | GenomeView

http://www.genomeview.org/content/missing-bai-file

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. Wed, 06/05/2013 - 17:24 Thomas Abeel. I copied the bam and bai file into a local folder but when I try to open them, I got an error message saying that it needed the bai file. The bai file was in the same folder. What am i doing wrong? The bai file needs to have the extension .bam.bai, not just bai. This will be fixed in a future release, but versions prior to 2170 may have problems with this.

genomeview.org genomeview.org

Cite us | GenomeView

http://www.genomeview.org/content/cite-us

Support - Frequently asked questions. Thomas Abeel, Broad Institute and Ghent University. Thomas Van Parys, VIB. Whenever you use GenomeView in your research, please cite us. GenomeView: a next-generation genome browser. Thomas Abeel; Thomas Van Parys; Yvan Saeys; James Galagan; Yves Van de Peer. Nucleic Acids Research 2011; doi: 10.1093/nar/gkr995. Bioinformatics and Evolutionary Genomics group at VIB. Source forge project page. Most creative visualization award @ Illumina iDEA challenge 2011.

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Het Haagse bedrijf ABEEL VASTGOED richt zich hoofdzakelijk op de zakelijke markt van het midden- en kleinbedrijf en is een onderdeel van Abeel Holding BV. De activiteiten bestaan uit het ontwikkelen en verhuren van betaalbare bedrijfspanden voor de startende ondernemer uitsluitend op goede, veilige en mooie locaties met voldoende parkeergelegenheid. Onze huurprijzen zijn zeer scherp en concurrerend en leegstand komt dan ook niet vaak voor. De laan van Waalhaven 139 in Ypenburg. Je wordt zodoende in staat...

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Antietam Elementary School - Christine Abeel

Code of Behavior: Spanish. Helping Children Learn Newsletter. Announcements Streaming Every School Day - Live and On Demand! Click here to access the website to view our school broadcasts. Transfer requests for Grades 1-3 for the 2015-16 school year are now CLOSED. My main instrument is the cello. As a strings teacher, I travel to 5 schools each week. I am so fortunate I get to play music all day at school with the 5th grade students! You must log in. To send a message to Christine Abeel.

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Thomas Abeel

Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement. Walker*, B., Abeel*, T. Shea, T., Priest, M., Abouelliel, A., Sakthikumar, S., Cuomo, C., Zeng, Q., Wortman, J., Young, S., Earl, A. [ PubMed. Evolution of invasion in a diverse set of Fusobacterium species. Manson McGuire, A., Cochrane, K., Griggs, A., Haas, B., Abeel, T. Zeng, Q., Nice, J., MacDonald, H., Birren, B., Berger, B., Allen-Vercoe, E., Earl, A. [ PubMed. Gomes, A., Abeel, T. Coppens, F&#4...

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Dolphin Gazette School Newspaper. Math Night Electronic Resources. Registration for New Students. Free and Reduced Meal Applications. Get Ready for the New Year! School Starts August 31. There are no pages at this time. I love working with all my 5th grade string students! You must log in. To send a message to Ms. Abeel. Note: No discussion topics posted yet. Site powered by SchoolFusion.com 2015 - Educational website content management.

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Salamo 3alaikom (hola),soy un chico joven de marruecos q vive ahora en españa, simplemente mi intención de crear ese blog era enseñaros el bueno de lo q es mi religion el islam . espero q os guste inchallah. 28/09/2006 at 12:02 PM. 10/01/2009 at 4:17 PM. Subscribe to my blog! Dis moi pourquoi tu ne pries pas قل لي لماذا لا تصلي. Add this video to my blog. Please enter the sequence of characters in the field below. Posted on Monday, 16 June 2008 at 1:16 PM. Add this video to my blog. Please enter the sequ...